RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CCNB1IP1Q9NPC3 277 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 POT1Q9NUX5 634 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 PSMC3IPQ9P2W1 217 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 UXTQ9UBK9 157 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 PRDM4Q9UKN5 801 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 FZR1Q9UM11 496 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 FKBP7Q9Y680 259 aa3.84□□□□□ -1.79
HMGB1P21-201ENST00000502313 LCTP09848 1927 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SMCHD1A6NHR9 2005 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ZNF840PA6NDX5 716 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 LRRIQ3A6PVS8 624 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PRR32B1ATL7 298 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ARPC1BO15143 372 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 TSPAN2O60636 221 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PROP1O75360 226 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NXPH2O95156 264 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 H1F0P07305 194 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 CCL5P13501 91 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NQO2P16083 231 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NAGAP17050 411 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 CCNOP22674 350 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 GTF2E2P29084 291 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 YWHABP31946 246 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 RPL9P32969 192 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 CDH5P33151 784 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 UGT1A5P35504 534 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 HPCAL1P37235 193 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SPAM1P38567 509 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MATKP42679 507 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 UQCRFS1P47985 274 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SGSHP51688 502 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NDUFA8P51970 172 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ATP5J2P56134 94 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PLP1P60201 277 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ISL1P61371 349 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MRPS6P82932 125 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PAX5Q02548 391 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 LRRC63Q05C16 580 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 CDH17Q12864 832 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 FOXF2Q12947 444 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ITGB3BPQ13352 177 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 TFDP1Q14186 410 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 FHL2Q14192 279 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 CRMP1Q14194 572 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 OPCMLQ14982 345 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 KNOP1Q1ED39 458 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ZNF284Q2VY69 593 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 LRRC37A5PQ49AS3 106 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 GPR33Q49SQ1 333 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ACSF3Q4G176 576 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 LGSNQ5TDP6 509 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SLX4IPQ5VYV7 408 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PTRHD1Q6GMV3 140 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NADSYN1Q6IA69 706 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 OR4C11Q6IEV9 310 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 VITQ6UXI7 678 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 LINGO4Q6UY18 593 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MRPL10Q7Z7H8 261 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 DCUN1D3Q8IWE4 304 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PPFIBP2Q8ND30 876 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 OR13C5Q8NGS8 318 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MTBPQ96DY7 904 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PCED1BQ96HM7 432 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 C10orf90Q96M02 699 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NEDD4LQ96PU5 975 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 FMO2Q99518 471 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SLC29A1Q99808 456 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 TMEM175Q9BSA9 504 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MIS12Q9H081 205 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 MAP6D1Q9H9H5 199 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PELI2Q9HAT8 420 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ZNF302Q9NR11 478 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 GDF3Q9NR23 364 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SLC38A7Q9NVC3 462 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 FLRT3Q9NZU0 649 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 SIX4Q9UIU6 781 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PRPF19Q9UMS4 504 aaKnown RBP3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 POLDIP2Q9Y2S7 368 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PPIL1Q9Y3C6 166 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 PCDHGB1Q9Y5G3 927 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 TIMM10BQ9Y5J6 103 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 DMRT1Q9Y5R6 373 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 UMODL1Q5DID0 1318 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 NID2Q14112 1375 aa3.83□□□□□ -1.8
HMGB1P21-201ENST00000502313 ALPK3Q96L96 1907 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 COL11A1P12107 1806 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 ABCB11O95342 1321 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 TRBV5-3A0A0A0MS03 114 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 TRBV11-1A0A0K0K1C0 115 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 A0A1W2PRB8 838 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 hDV102S1A0JD36 115 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 LRP5LA4QPB2 252 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 C5orf60A6NFR6 353 aa3.82□□□□□ -1.8
HMGB1P21-201ENST00000502313 FBLL1A6NHQ2 334 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms