RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TPRA1Q86W33 373 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 VRK2Q86Y07 508 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 SKA3Q8IX90 412 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF740Q8NDX6 193 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 OR51G2Q8NGK0 314 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 ARNTL2Q8WYA1 636 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CTNNBL1Q8WYA6 563 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 THRSPQ92748 146 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 SDHCQ99643 169 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CHIAQ9BZP6 476 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CCSER1Q9C0I3 900 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 GLIPR2Q9H4G4 154 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 COQ10BQ9H8M1 238 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 TREM2Q9NZC2 230 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 DCDC2Q9UHG0 476 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 RIMS3Q9UJD0 308 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 SCML2Q9UQR0 700 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 OR10H1Q9Y4A9 318 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 AP1M2Q9Y6Q5 423 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 A0A0J9YXY3 114 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 LOC100131303A0A0U1RQF7 123 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 CDX4O14627 284 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 LANCL1O43813 399 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 LALBAP00709 142 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 PCCBP05166 539 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 HPNP05981 417 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ASNSP08243 561 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ALOX5P09917 674 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 IGLL1P15814 213 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ELK1P19419 428 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 HTR2AP28223 471 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 CD1BP29016 333 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 STARP49675 285 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 AP3M2P53677 418 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 CSNK1G2P78368 415 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 EWSR1Q01844 656 aaKnown RBP eCLIP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 PJVKQ0ZLH3 352 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 RAB40BQ12829 278 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ARL6IP1Q15041 203 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 SYPL1Q16563 259 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 TATDN3Q17R31 274 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 FAM120AOSQ5T036 256 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 OTPQ5XKR4 325 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 WDR74Q6RFH5 385 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 CCDC65Q8IXS2 484 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 C15orf54Q8N8G6 183 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 DNAJA4Q8WW22 397 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 MAIP1Q8WWC4 291 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 FRAT1Q92837 279 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ELSPBP1Q96BH3 223 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 TBC1D31Q96DN5 1066 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 TXN2Q99757 166 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 GPA33Q99795 319 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 SLC6A7Q99884 636 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 GAL3ST1Q99999 423 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 NAT10Q9H0A0 1025 aaKnown RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 RIBC2Q9H4K1 309 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 PALMDQ9NP74 551 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ONECUT1Q9UBC0 465 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 GNG12Q9UBI6 72 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF221Q9UK13 617 aa2.28□□□□□ -2.04
PSPC1-205ENST00000497722 NAP1L2Q9ULW6 460 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-205ENST00000497722 LRRK1Q38SD2 2015 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 RAI1Q7Z5J4 1906 aaPredicted RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 SF3B1O75533 1304 aaKnown RBP eCLIP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 KIF16BQ96L93 1317 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 CLSPNQ9HAW4 1339 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 IGHV1OR15-1A0A075B7D0 117 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 BICDL2A1A5D9 508 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 K7ENP7 123 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 MSH4O15457 936 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TM7SF2O76062 418 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 SUPT7LO94864 414 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 SLITRK3O94933 977 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 GNA14O95837 355 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 P04436 131 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 IGF1P05019 195 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TSPY4P0CV99 314 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TSPY10P0CW01 314 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 KRT13P13646 458 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 CCDC130P13994 396 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 GCFC2P16383 781 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 DESP17661 470 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 NMT1P30419 496 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 HPCAL1P37235 193 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 GPC3P51654 580 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 PLA2G16P53816 162 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 BPIFB3P59826 476 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 PSG7Q13046 419 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 NSDHLQ15738 373 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 LINC01620Q4KN68 170 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 PAGE3Q5JUK9 113 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 CCDC50Q8IVM0 306 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 LINC01561Q8N1V8 128 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 DHRSXQ8N5I4 330 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 FADS6Q8N9I5 356 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 DCAF4L2Q8NA75 395 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 FAM151AQ8WW52 585 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 RPL3LQ92901 407 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms