RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 C14orf105Q9NVL8 296 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 THUMPD1Q9NXG2 353 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PDP1Q9P0J1 537 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 KIF17Q9P2E2 1029 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 DNAJB9Q9UBS3 223 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 COPS7AQ9UBW8 275 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PRODH2Q9UF12 536 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF639Q9UID6 485 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 KCNE5Q9UJ90 142 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PADI1Q9ULC6 663 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 LIPT1Q9Y234 373 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF443Q9Y2A4 671 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 MSRB2Q9Y3D2 182 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PCDHGB3Q9Y5G1 929 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 MRPS18BQ9Y676 258 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NUP210LQ5VU65 1888 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CACNA1HO95180 2353 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 EP300Q09472 2414 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZFHX2Q9C0A1 2572 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 VSTM2BA6NLU5 285 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TMX2-CTNND1H3BSU7 103 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GTPBP1O00178 669 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 KPNA4O00629 521 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 PCDH17O14917 1159 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CASQ2O14958 399 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ACOX3O15254 700 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ASNA1O43681 348 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SCO2O43819 266 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 LRP3O75074 770 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 STX11O75558 287 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 UGT2B17O75795 530 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CCNB2O95067 398 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NKX2-2O95096 273 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GADD45GO95257 159 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 RASAL1O95294 804 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 UTS2O95399 124 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SNAP29O95721 258 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CLIC3O95833 236 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 EPPINO95925 133 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 AGR2O95994 175 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 F10P00742 488 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SEMG1P04279 462 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 UMODP07911 640 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 PABPC4LP0CB38 370 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CT45A8P0DMV1 189 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CT45A9P0DMV2 189 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 HPGDP15428 266 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CCNA2P20248 432 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 POU1F1P28069 291 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 IL12BP29460 328 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 RBMS1P29558 406 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GCKP35557 465 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 KRT20P35900 424 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 DCTP40126 519 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ARHGDIAP52565 204 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TPD52P55327 224 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SLC37A1P57057 533 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 RGS8P57771 180 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SUMO1P63165 101 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ALDH6A1Q02252 535 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 PLCXD2Q0VAA5 305 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 FUT7Q11130 342 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ILKQ13418 452 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NCF4Q15080 339 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TGIF1Q15583 401 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NPTX1Q15818 432 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 DECR1Q16698 335 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 BTBD16Q32M84 506 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NRN1LQ496H8 165 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CT45A2Q5DJT8 189 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 FAM209AQ5JX71 171 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MRPL2Q5T653 305 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 FOXB2Q5VYV0 432 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 HEPHL1Q6MZM0 1159 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 PLEKHM3Q6ZWE6 761 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MED25Q71SY5 747 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CXXC5Q7LFL8 322 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TSEN54Q7Z6J9 526 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MARCH3Q86UD3 253 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 VASH2Q86V25 355 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CYP4Z1Q86W10 505 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 P3H2Q8IVL5 708 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 C9orf40Q8IXQ3 194 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OFCC1Q8IZS5 231 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MORN4Q8NDC4 146 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CATSPER1Q8NEC5 780 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OR9Q2Q8NGE9 314 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OR6T1Q8NGN1 323 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OR5K1Q8NHB7 308 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OR14A16Q8NHC5 309 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 WDR36Q8NI36 951 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GEMIN6Q8WXD5 167 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 DAZLQ92904 295 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms