RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PPP1R27Q86WC6 154 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 LINC01006Q8NI28 216 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 SLC5A11Q8WWX8 675 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 RSPH1Q8WYR4 309 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 THRSPQ92748 146 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 RPL3LQ92901 407 aaKnown RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 NEIL2Q969S2 332 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 RAB7BQ96AH8 199 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 MS4A14Q96JA4 679 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 TECTBQ96PL2 329 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CNPY3Q9BT09 278 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 SRXN1Q9BYN0 137 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 PTGES2Q9H7Z7 377 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 B3GNT2Q9NY97 397 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 CGNQ9P2M7 1197 aaKnown RBP3.37□□□□□ -1.87
VPS36-206ENST00000497149 ALG6Q9Y672 507 aa3.37□□□□□ -1.87
VPS36-206ENST00000497149 IGHV1OR15-1A0A075B7D0 117 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 IGHV7-81A0A0B4J1V7 117 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 IGHV2-70DA0A0C4DH43 119 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 XPO1O14980 1071 aaKnown RBP3.36□□□□□ -1.87
VPS36-206ENST00000497149 TBX19O60806 448 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 DUX4L4P0CJ87 422 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 CD1EP15812 388 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 PAX7P23759 505 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
VPS36-206ENST00000497149 HPCAL1P37235 193 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 EGFEM1PQ0D2K5 195 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 SLC10A7Q0GE19 358 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 MXD4Q14582 209 aaPredicted RBP3.36□□□□□ -1.87
VPS36-206ENST00000497149 SPATA46Q5T0L3 261 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 ATF7IP2Q5U623 682 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 PYHIN1Q6K0P9 492 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 SCARA5Q6ZMJ2 495 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 HSD17B13Q7Z5P4 300 aaPredicted RBP3.36□□□□□ -1.87
VPS36-206ENST00000497149 TMEM179BQ7Z7N9 219 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 CLDN19Q8N6F1 224 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 KIR3DL3Q8N743 410 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 OR10A7Q8NGE5 316 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 FAM3CQ92520 227 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 NUS1Q96E22 293 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 RIT2Q99578 217 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 OMDQ99983 421 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 RAB33BQ9H082 229 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 ELOVL3Q9HB03 270 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 NANSQ9NR45 359 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 BLOC1S6Q9UL45 172 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 PLLPQ9Y342 182 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 MAD1L1Q9Y6D9 718 aa3.36□□□□□ -1.87
VPS36-206ENST00000497149 ZNF318Q5VUA4 2279 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 IGKV6D-41A0A0C4DH26 115 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 TMEM110-MUSTN1A8MSY1 372 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 NPIPA7E9PJI5 369 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 ADCY5O95622 1261 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 H2BFMP0C1H6 154 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 NPIPA8P0DM63 369 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 HNRNPA2B1P22626 353 aaKnown RBP3.35□□□□□ -1.87
VPS36-206ENST00000497149 UQCRC2P22695 453 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 NTSP30990 170 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 RGS4P49798 205 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 ZNF45Q02386 682 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 CUL1Q13616 776 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 PDK4Q16654 411 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 TMEM110Q86TL2 294 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 ZNF589Q86UQ0 364 aaPredicted RBP3.35□□□□□ -1.87
VPS36-206ENST00000497149 LCA5Q86VQ0 697 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 SKA3Q8IX90 412 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 SLC38A6Q8IZM9 456 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 MTURNQ8N3F0 131 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 OR51G2Q8NGK0 314 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 OR5L2Q8NGL0 311 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 ANKRD49Q8WVL7 239 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 NICN1Q9BSH3 213 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 NAT10Q9H0A0 1025 aaKnown RBP3.35□□□□□ -1.87
VPS36-206ENST00000497149 ZNF385DQ9H6B1 395 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 PDFQ9HBH1 243 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 UBQLN1Q9UMX0 589 aaKnown RBP3.35□□□□□ -1.87
VPS36-206ENST00000497149 NPIPA1Q9UND3 350 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 SCML2Q9UQR0 700 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 KDRP35968 1356 aa3.35□□□□□ -1.87
VPS36-206ENST00000497149 CHD4Q14839 1912 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 LRRK1Q38SD2 2015 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 G3V4G9 280 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 K7N7A8 449 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 BTN3A3O00478 584 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 ECI2O75521 394 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 RNH1P13489 461 aaKnown RBP3.34□□□□□ -1.87
VPS36-206ENST00000497149 PSMA5P28066 241 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 HOXD10P28358 340 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 AQP1P29972 269 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 ADSSP30520 456 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 BTDP43251 543 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 TPRA1Q86W33 373 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 TGIF2LYQ8IUE0 185 aa3.34□□□□□ -1.87
VPS36-206ENST00000497149 BBS1Q8NFJ9 593 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms