RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 ELK4P28324 431 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 ADH6P28332 368 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 EEFSECP57772 596 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 PLAURQ03405 335 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 SCARB2Q14108 478 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 LARS2Q15031 903 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 MRPL2Q5T653 305 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 NSUN5P2Q63ZY6 315 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 REEP3Q6NUK4 255 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 VRK2Q86Y07 508 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 FBXO27Q8NI29 283 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 ST8SIA1Q92185 356 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 CNOT9Q92600 299 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 SDCCAG3Q96C92 435 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 LRRC58Q96CX6 371 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 RCN3Q96D15 328 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 MRGPRX4Q96LA9 322 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 SH3GL1Q99961 368 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 CCDC106Q9BWC9 280 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 KAT8Q9H7Z6 458 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 GID8Q9NWU2 228 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 DNAJB12Q9NXW2 375 aaKnown RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 FAM53CQ9NYF3 392 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 ZNF443Q9Y2A4 671 aaPredicted RBP14.65□□□□□ -0.06
YIF1A-209ENST00000494836 IFT52Q9Y366 437 aa14.65□□□□□ -0.06
YIF1A-209ENST00000494836 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CLCA1A8K7I4 914 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 KDM4EB2RXH2 506 aaPredicted RBP14.64□□□□□ -0.07
YIF1A-209ENST00000494836 COX4I1P13073 169 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ETS2P15036 469 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CHRNB4P30926 498 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 RYKP34925 604 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 SLC6A8P48029 635 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CLDN20P56880 219 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 RAC1P63000 192 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ADRM1Q16186 407 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ZSWIM7Q19AV6 140 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 RIPPLY2Q5TAB7 128 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 RNF220Q5VTB9 566 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 NANOGP8Q6NSW7 305 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ZNF836Q6ZNA1 936 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 SEM1Q6ZVN7 128 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CHMP1BQ7LBR1 199 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 PIGWQ7Z7B1 504 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 KRT73Q86Y46 540 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 C11orf65Q8NCR3 313 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 OR8J3Q8NGG0 315 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ZNF563Q8TA94 476 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CA5BP1Q8WTZ4 195 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ASB5Q8WWX0 329 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 TMEM234Q8WY98 164 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 MYLK2Q9H1R3 596 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ARMC7Q9H6L4 198 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 TMEM185BQ9H7F4 350 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 NANOGQ9H9S0 305 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 CALHM2Q9HA72 323 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ZNF232Q9UNY5 417 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 RNF6Q9Y252 685 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ANGPT4Q9Y264 503 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ARL2BPQ9Y2Y0 163 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 HEATR5AQ86XA9 2040 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ICE1Q9Y2F5 2266 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 ARHGAP21Q5T5U3 1957 aa14.64□□□□□ -0.07
YIF1A-209ENST00000494836 A0A0G2JNJ9 132 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CDHR4A6H8M9 788 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 H0YC42 278 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 ETV2O00321 342 aaPredicted RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CLDN14O95500 239 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 NTN1O95631 604 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CLDN1O95832 211 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 PABPC4LP0CB38 370 aaKnown RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 UQCRBP14927 111 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 TIMP3P35625 211 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 SUCLG1P53597 346 aaKnown RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 TPD52P55327 224 aaPredicted RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CLDN15P56746 228 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 RPS3AP61247 264 aaKnown RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 EEF1A1P68104 462 aaKnown RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 RBBP4Q09028 425 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 SLC25A53Q5H9E4 307 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 RABL3Q5HYI8 236 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 ZNF311Q5JNZ3 666 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 MAMDC2Q7Z304 686 aaPredicted RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 ADGRE4PQ86SQ3 457 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 SERPINA11Q86U17 422 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 GGNQ86UU5 652 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 PTOV1Q86YD1 416 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 TREML1Q86YW5 311 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CCDC71Q8IV32 467 aaPredicted RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 ZNF440Q8IYI8 595 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 HIPK4Q8NE63 616 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 OR10A6Q8NH74 314 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 SPATA5L1Q9BVQ7 753 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 RLIMQ9NVW2 624 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 CLCF1Q9UBD9 225 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 PLEKHB1Q9UF11 243 aaPredicted RBP14.63□□□□□ -0.07
YIF1A-209ENST00000494836 Q9UFV3 132 aa14.63□□□□□ -0.07
YIF1A-209ENST00000494836 MBD3L4A6NDZ8 208 aaPredicted RBP14.62□□□□□ -0.07
YIF1A-209ENST00000494836 MBD3L3A6NE82 208 aaPredicted RBP14.62□□□□□ -0.07
YIF1A-209ENST00000494836 CFAP73A6NFT4 308 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms