RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 COQ5Q5HYK3 327 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 PRAMEF8Q5VWM4 474 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 PRAMEF7Q5VXH5 474 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 REP15Q6BDI9 236 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 HIST2H2BCQ6DN03 193 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CMIPQ8IY22 773 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 PEX5LQ8IYB4 626 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 NAXEQ8NCW5 288 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 OR52P1PQ8NH57 321 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 SMPDL3BQ92485 455 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CCDC106Q9BWC9 280 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 CHST2Q9Y4C5 530 aa21.12■□□□□ 0.97
CLIC3-203ENST00000494426 GPC6Q9Y625 555 aaPredicted RBP21.12■□□□□ 0.97
CLIC3-203ENST00000494426 PTPN13Q12923 2485 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MBD3L4A6NDZ8 208 aaPredicted RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MBD3L3A6NE82 208 aaPredicted RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 TMEM247A6NEH6 219 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MBD3L5A6NJ08 208 aaPredicted RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 FXYD1O00168 92 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 SEC14L5O43304 696 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 CCDC22O60826 627 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 PGM3O95394 542 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 CLDN14O95500 239 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 OPN1LWP04000 364 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 ADH6P28332 368 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 GNA13Q14344 377 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 TRMT5Q32P41 509 aaKnown RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 CPLX4Q7Z7G2 160 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MTDHQ86UE4 582 aaKnown RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 LIX1LQ8IVB5 337 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MEIOBQ8N635 442 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 METTL25Q8N6Q8 603 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 C9orf106Q8NAJ2 232 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 MBD3L2Q8NHZ7 208 aaPredicted RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 NFKBIDQ8NI38 313 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 ASB5Q8WWX0 329 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 SLC39A3Q9BRY0 314 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 RSPO3Q9BXY4 272 aaPredicted RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 TMEM38AQ9H6F2 299 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 EXOSC3Q9NQT5 275 aaKnown RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 DNAJB12Q9NXW2 375 aaKnown RBP21.11■□□□□ 0.97
CLIC3-203ENST00000494426 CLCF1Q9UBD9 225 aa21.11■□□□□ 0.97
CLIC3-203ENST00000494426 DOCK7Q96N67 2140 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 BBIP1A8MTZ0 92 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 MRASO14807 208 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 GP1BBP13224 206 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 COL8A1P27658 744 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 GRNP28799 593 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 CHRNB4P30926 498 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 RAC1P63000 192 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 EEF1A1P68104 462 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 CDK6Q00534 326 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 CYLC2Q14093 348 aaPredicted RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 CTU2Q2VPK5 515 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 MRPL2Q5T653 305 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 NANOGP8Q6NSW7 305 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 POMZP3Q6PJE2 187 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 ZNF836Q6ZNA1 936 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 PTOV1Q86YD1 416 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 TREML1Q86YW5 311 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 POU5F2Q8N7G0 328 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 LILRB4Q8NHJ6 448 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 BBS10Q8TAM1 723 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 LRRC58Q96CX6 371 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 ADGRG7Q96K78 797 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 MRGPRX4Q96LA9 322 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 NSRP1Q9H0G5 558 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 MYLK2Q9H1R3 596 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 KAT8Q9H7Z6 458 aaKnown RBP21.1■□□□□ 0.97
CLIC3-203ENST00000494426 NANOGQ9H9S0 305 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 RLIMQ9NVW2 624 aa21.1■□□□□ 0.97
CLIC3-203ENST00000494426 CDHR4A6H8M9 788 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 TGM6O95932 706 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 PGCP20142 388 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 SHC1P29353 583 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 RYKP34925 604 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 GZMMP51124 257 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 DLX5P56178 289 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 SESN3P58005 492 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 MMEL1Q495T6 779 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 CLIP4Q8N3C7 705 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 CA5BP1Q8WTZ4 195 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 ZNF845Q96IR2 970 aaPredicted RBP21.09■□□□□ 0.97
CLIC3-203ENST00000494426 UCK2Q9BZX2 261 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 TMEM185BQ9H7F4 350 aa21.09■□□□□ 0.97
CLIC3-203ENST00000494426 ZNF443Q9Y2A4 671 aaPredicted RBP21.09■□□□□ 0.97
CLIC3-203ENST00000494426 KLF2Q9Y5W3 355 aaPredicted RBP21.09■□□□□ 0.97
CLIC3-203ENST00000494426 A0A0J9YW62 118 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 C5orf58C9J3I9 102 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 AP3D1O14617 1153 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 IL2RAP01589 272 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 THBS1P07996 1170 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 ELK4P28324 431 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 ZNF136P52737 540 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 EEFSECP57772 596 aaKnown RBP21.08■□□□□ 0.97
CLIC3-203ENST00000494426 SPTAN1Q13813 2472 aaKnown RBP21.08■□□□□ 0.97
CLIC3-203ENST00000494426 SCARB2Q14108 478 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 LIN52Q52LA3 116 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 REEP3Q6NUK4 255 aa21.08■□□□□ 0.97
CLIC3-203ENST00000494426 NET1Q7Z628 596 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms