RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ZNF551Q7Z340 670 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 ZNF550Q7Z398 422 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 TDRPQ86YL5 185 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CEP112Q8N8E3 955 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 OR5M1Q8NGP8 315 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CDC26Q8NHZ8 85 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 HSD17B8Q92506 261 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 OSTF1Q92882 214 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 CPNE4Q96A23 557 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PPCDCQ96CD2 204 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 PERPQ96FX8 193 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 REXO5Q96IC2 774 aaKnown RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 EGLN2Q96KS0 407 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 HS3ST6Q96QI5 342 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 NR1H4Q96RI1 486 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-212ENST00000492407 STACQ99469 402 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 TXLNGYQ9BZA5 131 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 ACTR6Q9GZN1 396 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 L2HGDHQ9H9P8 463 aa8.16□□□□□ -1.1
HDAC3-212ENST00000492407 A0A0J9YW62 118 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 H3BNH8 94 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 GOLGA8RI6L899 631 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 AZIN1O14977 448 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 CXCL13O43927 109 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 KRT16P08779 473 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 LINGO3P0C6S8 592 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 NID1P14543 1247 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 RFX3P48380 749 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 RPS4XP62701 263 aaKnown RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 HSPB3Q12988 150 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 EXOC3L2Q2M3D2 409 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 LIPMQ5VYY2 423 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 Q6ZSR9 355 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 Q71RC1 249 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 GALNT10Q86SR1 603 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 LILRA2Q8N149 483 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 CIARTQ8N365 385 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 SLC43A2Q8N370 569 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 ZNF527Q8NB42 609 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 SLC16A11Q8NCK7 471 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 PSMA8Q8TAA3 256 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 RNF128Q8TEB7 428 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 ROBO4Q8WZ75 1007 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 PIK3R3Q92569 461 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 SLC9A6Q92581 669 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 GTPBP3Q969Y2 492 aaKnown RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 ARL8AQ96BM9 186 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 MOAP1Q96BY2 351 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 TRMT61AQ96FX7 289 aaKnown RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 ZC3HAV1LQ96H79 300 aaKnown RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 KLHL15Q96M94 604 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 BTBD2Q9BX70 525 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 PIGUQ9H490 435 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 ATP6V1HQ9UI12 483 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 VDAC3Q9Y277 283 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 SH3GLB1Q9Y371 365 aa8.15□□□□□ -1.1
HDAC3-212ENST00000492407 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-212ENST00000492407 MED12LQ86YW9 2145 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 A0A1W2PPM1 405 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 TMEM114B3SHH9 223 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 OVOL3O00110 214 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ETV2O00321 342 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 GCM2O75603 506 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 LYPLA1O75608 230 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 PRKD3O94806 890 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 YES1P07947 543 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ACP2P11117 423 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 SDC1P18827 310 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 MAPK1P28482 360 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 AGTR1P30556 359 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 IDUAP35475 653 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 P2RX1P51575 399 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 PRKAG1P54619 331 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 POU6F2P78424 691 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF239Q16600 458 aaKnown RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 DUSP5Q16690 384 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 RFTN2Q52LD8 501 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 KLHL26Q53HC5 615 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 SFRP5Q5T4F7 317 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 FAM219BQ5XKK7 198 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ANKRD34AQ69YU3 496 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 GABRG1Q8N1C3 465 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 COX18Q8N8Q8 333 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 POC1BQ8TC44 478 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 OIT3Q8WWZ8 545 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 PLPPR2Q96GM1 343 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 RNF145Q96MT1 663 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ESRP2Q9H6T0 727 aaKnown RBP8.14□□□□□ -1.11
HDAC3-212ENST00000492407 EQTNQ9NQ60 294 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ATAD3AQ9NVI7 634 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 SH3BP4Q9P0V3 963 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 KLHL13Q9P2N7 655 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 TAGLN3Q9UI15 199 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 ICAM5Q9UMF0 924 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms