RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ZNF418Q8TF45 676 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 IFT81Q8WYA0 676 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 SH3YL1Q96HL8 342 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 BBS4Q96RK4 519 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 KCNA7Q96RP8 456 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 MYOZ1Q9NP98 299 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 SIRT5Q9NXA8 310 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 TMEM216Q9P0N5 145 aa12.14□□□□□ -0.47
ATG4B-222ENST00000491867 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-222ENST00000491867 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 CIB4A0PJX0 185 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 GXYLT2A0PJZ3 443 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 CCDC151A5D8V7 595 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 ALG1L2C9J202 215 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 EFNA2O43921 213 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 PSMG1O95456 288 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 IGKV1D-16P01601 117 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 JUNP05412 331 aaKnown RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 ATP5F1P24539 256 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 NCBP2P52298 156 aaKnown RBP eCLIP12.13□□□□□ -0.472e-8■■■■■ 28.7
ATG4B-222ENST00000491867 CHN2P52757 468 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 PHC1P78364 1004 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 SLC18A2Q05940 514 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 ZSWIM7Q19AV6 140 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 PRSS53Q2L4Q9 553 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 TMEM107Q6UX40 140 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 SLC22A9Q8IVM8 553 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 ZNF100Q8IYN0 542 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 OR2L13Q8N349 312 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 MMGT1Q8N4V1 131 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 NOA1Q8NC60 698 aaKnown RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 CDC26Q8NHZ8 85 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 HPS1Q92902 700 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 L3HYPDHQ96EM0 354 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 SNX18Q96RF0 628 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 VRK1Q99986 396 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 PSD2Q9BQI7 771 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 FKRPQ9H9S5 495 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 NTMQ9P121 344 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 KLHL9Q9P2J3 617 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 C19orf53Q9UNZ5 99 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-222ENST00000491867 TIMM22Q9Y584 194 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 PCDHGB1Q9Y5G3 927 aa12.13□□□□□ -0.47
ATG4B-222ENST00000491867 SERTM1A2A2V5 107 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 UPK1AO00322 258 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 RGS14O43566 566 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 GCAP28676 217 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 GABRA3P34903 492 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 PRKAA2P54646 552 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 CDH15P55291 814 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 BTKQ06187 659 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 C2orf80Q0P641 193 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 MLC1Q15049 377 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 ZNHIT3Q15649 155 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-222ENST00000491867 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 SPDYAQ5MJ70 313 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 DEF8Q6ZN54 512 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 SLC46A3Q7Z3Q1 461 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATG4B-222ENST00000491867 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-222ENST00000491867 RBM4Q9BWF3 364 aaKnown RBP12.12□□□□□ -0.47
ATG4B-222ENST00000491867 GSTO2Q9H4Y5 243 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 COQ10BQ9H8M1 238 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 MIEF1Q9NQG6 463 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 DDX18Q9NVP1 670 aaKnown RBP12.12□□□□□ -0.47
ATG4B-222ENST00000491867 TAS2R7Q9NYW3 318 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 GRID1Q9ULK0 1009 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 TRAF6Q9Y4K3 522 aa12.12□□□□□ -0.47
ATG4B-222ENST00000491867 LILRA1O75019 489 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 OXSR1O95747 527 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 ABHD2P08910 425 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 TACSTD2P09758 323 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 LINGO3P0C6S8 592 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 PCMT1P22061 227 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 NTSP30990 170 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 FOXA1P55317 472 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 HILS1P60008 231 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 FOXF1Q12946 379 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 FAM71E1Q6IPT2 247 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 TREML4Q6UXN2 200 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 AMDHD1Q96NU7 426 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
ATG4B-222ENST00000491867 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
ATG4B-222ENST00000491867 GLIPR2Q9H4G4 154 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms