RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 ELOAQ14241 798 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 NNATQ16517 81 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 BTN2A1Q7KYR7 527 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 COMTD1Q86VU5 262 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 PAQR7Q86WK9 346 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 COX18Q8N8Q8 333 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 PFN4Q8NHR9 129 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 DUSP19Q8WTR2 217 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ACOT11Q8WXI4 607 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 NUS1Q96E22 293 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SEC22AQ96IW7 307 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SORCS2Q96PQ0 1159 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 TMEM27Q9HBJ8 222 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 FGF20Q9NP95 211 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 TESQ9UGI8 421 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ACSL5Q9ULC5 683 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 NOP16Q9Y3C1 178 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 Q9Y3F1 56 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 INSL5Q9Y5Q6 135 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SEC16AO15027 2179 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF705EA8MWA4 302 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SDC3O75056 442 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CTRB1P17538 263 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ATF1P18846 271 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 PVALBP20472 110 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 DCTDP32321 178 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 FAUP35544 74 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SIM1P81133 766 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CDK5Q00535 292 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OTPQ5XKR4 325 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CTRB2Q6GPI1 263 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 C1orf94Q6P1W5 598 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 GSG1LQ6UXU4 331 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 DNAAF1Q8NEP3 725 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR10K1Q8NGX5 313 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 LHFPL5Q8TAF8 219 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SYNPRQ8TBG9 265 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CXorf40AQ8TE69 158 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 C2orf15Q8WU43 125 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CNOT9Q92600 299 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR7D2Q96RA2 312 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SGIP1Q9BQI5 828 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 KLHL31Q9H511 634 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CWH43Q9H720 699 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 WASH6PQ9NQA3 447 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 IL36AQ9UHA7 158 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 TP53BP1Q12888 1972 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ARPC4-TTLL3A0A0A6YYG9 625 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 KANTRA0A1W2PQU2 76 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR14I1A6ND48 311 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 HOXA2O43364 376 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 RCBTB2O95199 551 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 TIMP2P16035 220 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 VAMP1P23763 118 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 HTR1FP30939 366 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 S100A11P31949 105 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 AGERQ15109 404 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SWI5Q1ZZU3 235 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR4C11Q6IEV9 310 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ZNF676Q8N7Q3 588 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 POGLUT1Q8NBL1 392 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR5M1Q8NGP8 315 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 OR10G6Q8NH81 332 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 FIBINQ8TAL6 211 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 CDS1Q92903 461 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 GHITMQ9H3K2 345 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ASF1BQ9NVP2 202 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 ASB6Q9NWX5 421 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 POMT2Q9UKY4 750 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 SF3B6Q9Y3B4 125 aaKnown RBP9.15□□□□□ -0.94
ERCC3-208ENST00000491292 MED31Q9Y3C7 131 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 PLXNA1Q9UIW2 1896 aa9.15□□□□□ -0.94
ERCC3-208ENST00000491292 A8MVJ9 347 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 F5H0A9 414 aaPredicted RBP9.15□□□□□ -0.95
ERCC3-208ENST00000491292 PPM1BO75688 479 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 RBBP9O75884 186 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 SERPINA3P01011 423 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 CBR1P16152 277 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 TRHRP34981 398 aaPredicted RBP9.15□□□□□ -0.95
ERCC3-208ENST00000491292 EEF1A2Q05639 463 aaKnown RBP9.15□□□□□ -0.95
ERCC3-208ENST00000491292 FAM220AQ7Z4H9 259 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 CMTM4Q8IZR5 234 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 OR2A12Q8NGT7 310 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 TSEN15Q8WW01 171 aaKnown RBP9.15□□□□□ -0.95
ERCC3-208ENST00000491292 ZC3HAV1LQ96H79 300 aaKnown RBP9.15□□□□□ -0.95
ERCC3-208ENST00000491292 HCAR1Q9BXC0 346 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 CCL26Q9Y258 94 aa9.15□□□□□ -0.95
ERCC3-208ENST00000491292 ATG2BQ96BY7 2078 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 FOXE1O00358 373 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-208ENST00000491292 KIAA0355O15063 1070 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 RPN2P04844 631 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 NAT2P11245 290 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 ACHEP22303 614 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 DGLUCYQ7Z3D6 616 aa9.14□□□□□ -0.95
ERCC3-208ENST00000491292 GDF7Q7Z4P5 450 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms