RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 DLEU7Q6UYE1 221 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 P4HA3Q7Z4N8 544 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 GGNQ86UU5 652 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 ST8SIA1Q92185 356 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 NPAS1Q99742 590 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 SPOCK3Q9BQ16 436 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 TREX2Q9BQ50 279 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 CACYBPQ9HB71 228 aaKnown RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 A4GALTQ9NPC4 353 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
MDC1-206ENST00000489540 ZNF232Q9UNY5 417 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 ZNF175Q9Y473 711 aa15.62■□□□□ 0.09
MDC1-206ENST00000489540 SLC22A20A6NK97 555 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 GJE1A6NN92 205 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 EIF1AYO14602 144 aaKnown RBP15.61■□□□□ 0.09
MDC1-206ENST00000489540 ADAMDEC1O15204 470 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 NID1P14543 1247 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 GPX2P18283 190 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 BMP5P22003 454 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 ADSLP30566 484 aaPredicted RBP15.61■□□□□ 0.09
MDC1-206ENST00000489540 ZNF136P52737 540 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 TFF3Q07654 80 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 SF3A3Q12874 501 aaKnown RBP eCLIP15.61■□□□□ 0.09
MDC1-206ENST00000489540 ZNF787Q6DD87 383 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 OR2A2Q6IF42 318 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 ESPNLQ6ZVH7 1005 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 HMGN2P46Q86SG4 172 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 LILRA2Q8N149 483 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 WDR60Q8WVS4 1066 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 LRRC46Q96FV0 321 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 TMEM19Q96HH6 336 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 PINK1Q9BXM7 581 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 BCL2L10Q9HD36 194 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 SAR1AQ9NR31 198 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 PRDM4Q9UKN5 801 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 DSPPQ9NZW4 1301 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 MED12Q93074 2177 aa15.61■□□□□ 0.09
MDC1-206ENST00000489540 CLDN24A6NM45 220 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 C19orf84I3L1E1 186 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 DYNC1I1O14576 645 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 NTN1O95631 604 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 TGM6O95932 706 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 CRHP06850 196 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 NUDT7P0C024 238 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 COX6B1P14854 86 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 EIF1AXP47813 144 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 LARS2Q15031 903 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 LIN52Q52LA3 116 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 RUNDC3AQ59EK9 446 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 POMZP3Q6PJE2 187 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 OR52P1PQ8NH57 321 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 OR2V1Q8NHB1 315 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 INTS12Q96CB8 462 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 SFXN3Q9BWM7 321 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ARMC7Q9H6L4 198 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ACER3Q9NUN7 267 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 IFT52Q9Y366 437 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 PHF3Q92576 2039 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 C5orf58C9J3I9 102 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 SYT5O00445 386 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 EFNA2O43921 213 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 BCAS1O75363 584 aaPredicted RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 CARD18P57730 90 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 SESN3P58005 492 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 SELENBP1Q13228 472 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 NFYCQ13952 458 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 PON3Q15166 354 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 MAPRE2Q15555 327 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 CTU2Q2VPK5 515 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 GCNT6Q5T4J0 391 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 DHDDSQ86SQ9 333 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 RETREG3Q86VR2 466 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ZNF440Q8IYI8 595 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ACBD4Q8NC06 268 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 OR10D3Q8NH80 312 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ZNF563Q8TA94 476 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 BBS10Q8TAM1 723 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 FIG4Q92562 907 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 CNOT9Q92600 299 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 MAL2Q969L2 176 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ZNF524Q96C55 264 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ZNF845Q96IR2 970 aaPredicted RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 ADGRG7Q96K78 797 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 KLHL15Q96M94 604 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 CGREF1Q99674 301 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 ENKD1Q9H0I2 346 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 TMEM185BQ9H7F4 350 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 TIGARQ9NQ88 270 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 SERINC1Q9NRX5 453 aa15.6■□□□□ 0.09
MDC1-206ENST00000489540 DNAJB12Q9NXW2 375 aaKnown RBP15.6■□□□□ 0.09
MDC1-206ENST00000489540 A0A0J9YW62 118 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 SLC22A2O15244 555 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 OPN1LWP04000 364 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 THBS1P07996 1170 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 FCGR2AP12318 317 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 UQCRBP14927 111 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 IL11P20809 199 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 RYKP34925 604 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 DLX5P56178 289 aa15.59■□□□□ 0.09
MDC1-206ENST00000489540 KLF10Q13118 480 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms