RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CCDC22O60826 627 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 RCBTB2O95199 551 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 PLGP00747 810 aaPredicted RBP11.62□□□□□ -0.55
PHF1-210ENST00000488767 TFPTP0C1Z6 253 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 NID1P14543 1247 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 PRKCAP17252 672 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 COL8A1P27658 744 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 SLC7A1P30825 629 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 PGM1P36871 562 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 PEX19P40855 299 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 CLDN15P56746 228 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 SF3A3Q12874 501 aaKnown RBP eCLIP11.62□□□□□ -0.555e-12■■■■■ 29.8
PHF1-210ENST00000488767 MAPK14Q16539 360 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 NDUFAF6Q330K2 333 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 COQ5Q5HYK3 327 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 PAGE3Q5JUK9 113 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 HBMQ6B0K9 141 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 C3orf33Q6P1S2 294 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 OLIG3Q7RTU3 272 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 SLC38A5Q8WUX1 472 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 KLHL15Q96M94 604 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 TREX2Q9BQ50 279 aaPredicted RBP11.62□□□□□ -0.55
PHF1-210ENST00000488767 SPATA5L1Q9BVQ7 753 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 QRSL1Q9H0R6 528 aaKnown RBP11.62□□□□□ -0.55
PHF1-210ENST00000488767 TMEM185BQ9H7F4 350 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
PHF1-210ENST00000488767 TRBV5-3A0A0A0MS03 114 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 NKX2-6A6NCS4 301 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 EEF1E1-BLOC1S5C9J1V9 151 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 OIP5O43482 229 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 IL18BPO95998 194 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 NPPAP01160 153 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 C1QCP02747 245 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CRHP06850 196 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 THBS1P07996 1170 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 PABPC4LP0CB38 370 aaKnown RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 SLC6A2P23975 617 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 FKBP2P26885 142 aaKnown RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 RYKP34925 604 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 HTR3AP46098 478 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 ASCL1P50553 236 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CLDN20P56880 219 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CARD18P57730 90 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 COPZ1P61923 177 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 MERTKQ12866 999 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CYLC2Q14093 348 aaPredicted RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 PON3Q15166 354 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CYP51A1Q16850 503 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 REEP3Q6NUK4 255 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CPLX4Q7Z7G2 160 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 ADGRE4PQ86SQ3 457 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 MCEMP1Q8IX19 187 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 C9orf106Q8NAJ2 232 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 PCYOX1LQ8NBM8 494 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 ATP6V1C2Q8NEY4 427 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 OR52P1PQ8NH57 321 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 OR2V1Q8NHB1 315 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 SLC25A43Q8WUT9 341 aaPredicted RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 C10orf82Q8WW14 230 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 INTS12Q96CB8 462 aaKnown RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 ZNF607Q96SK3 696 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 UCK2Q9BZX2 261 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 SAR1AQ9NR31 198 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 SLC25A37Q9NYZ2 338 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 VAPAQ9P0L0 249 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CLCF1Q9UBD9 225 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 FOXD3Q9UJU5 478 aaPredicted RBP11.61□□□□□ -0.55
PHF1-210ENST00000488767 ANGPT4Q9Y264 503 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 CAPN7Q9Y6W3 813 aa11.61□□□□□ -0.55
PHF1-210ENST00000488767 DSPPQ9NZW4 1301 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 PHF3Q92576 2039 aaKnown RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 FREM3P0C091 2139 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 CENPEQ02224 2701 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 NCOA6Q14686 2063 aaPredicted RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 PRAMEF27A3QJZ7 478 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 GMNCA6NCL1 334 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 TNFSF11O14788 317 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 DNAJA2O60884 412 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 SERPINB7O75635 380 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 TOXO94900 526 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 GPX2P18283 190 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 LSP1P33241 339 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 SFTPDP35247 375 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 APOBEC1P41238 236 aaKnown RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 CPA2P48052 419 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 CDK6Q00534 326 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 SLC25A53Q5H9E4 307 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
PHF1-210ENST00000488767 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
PHF1-210ENST00000488767 RNF220Q5VTB9 566 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms