RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZNF793Q6ZN11 406 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 SLC35F2Q8IXU6 374 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 PRR22Q8IZ63 422 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 MSANTD3Q96H12 275 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 C4orf36Q96KX1 117 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 ORAI3Q9BRQ5 295 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 RPP25Q9BUL9 199 aaKnown RBP10.99□□□□□ -0.65
TRA2B-214ENST00000487615 PTGES2Q9H7Z7 377 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 PRDM7Q9NQW5 492 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 POLE3Q9NRF9 147 aa10.99□□□□□ -0.65
TRA2B-214ENST00000487615 TRAV6A0A075B6T7 132 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 A0A1B0GWA3 101 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 THBS1P07996 1170 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 GRK5P34947 590 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ARHGAP11BQ3KRB8 267 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 PAQR7Q86WK9 346 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CRIPAKQ8N1N5 446 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 NANOGP1Q8N7R0 232 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 OR51Q1Q8NH59 317 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 RSC1A1Q92681 617 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 FOLH1BQ9HBA9 442 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 LRIT1Q9P2V4 623 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 NLKQ9UBE8 527 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SUSD2Q9UGT4 822 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 A0A1W2PQ09 198 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 GABRPO00591 440 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 STOMP27105 288 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 HTR1FP30939 366 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 RPS25P62851 125 aaKnown RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CTF1Q16619 201 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SOWAHCQ53LP3 525 aaPredicted RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 STEAP3Q658P3 488 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ZNF613Q6PF04 617 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CLDN22Q8N7P3 220 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 FUZQ9BT04 418 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 MED20Q9H944 212 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 FBXO8Q9NRD0 319 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 UPB1Q9UBR1 384 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SLC22A7Q9Y694 548 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 OTOL1A6NHN0 477 aaPredicted RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 AQP9O43315 295 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 FGF17O60258 216 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CTNSO60931 367 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 S1PR1P21453 382 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SSTR4P31391 388 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CD97P48960 835 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ERVK-25P63136 954 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ADAM8P78325 824 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 C11orf91Q3C1V1 193 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 C1orf94Q6P1W5 598 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ADGRF3Q8IZF5 1079 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 TMEM156Q8N614 296 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SLC6A18Q96N87 628 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 DOK1Q99704 481 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 HHATLQ9HCP6 504 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 RARRES3Q9UL19 164 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ZNF337Q9Y3M9 751 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 LOC105369274A0A096LPK9 316 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 LOC102723532A0A0G2JNH3 316 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 IQCMA0A1B0GVH7 501 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 FAM171A2A8MVW0 826 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 GZMMP51124 257 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 GFOD2Q3B7J2 385 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ACSM3Q53FZ2 586 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 WBP2NLQ6ICG8 309 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 BAIAP2L2Q6UXY1 529 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 TMPRSS12Q86WS5 348 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 OR4N4Q8N0Y3 316 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 TRMT10AQ8TBZ6 339 aaKnown RBP10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 LPAR4Q99677 370 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 SLAMF7Q9NQ25 335 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CUTCQ9NTM9 273 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 ASB4Q9Y574 426 aa10.98□□□□□ -0.65
TRA2B-214ENST00000487615 CACNA1CQ13936 2221 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 SOCS6O14544 535 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 CDC40O60508 579 aaKnown RBP eCLIP10.97□□□□□ -0.651e-8■■■■■ 31.8
TRA2B-214ENST00000487615 NR2C1P13056 603 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 OR1D4P47884 311 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
TRA2B-214ENST00000487615 PCBP3P57721 371 aaKnown RBP10.97□□□□□ -0.65
TRA2B-214ENST00000487615 PCBP4P57723 403 aaKnown RBP10.97□□□□□ -0.65
TRA2B-214ENST00000487615 HYAL1Q12794 435 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 LAX1Q8IWV1 398 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 AMER3Q8N944 861 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 DEFB126Q9BYW3 111 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 CHST8Q9H2A9 424 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 SIAEQ9HAT2 523 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 SACM1LQ9NTJ5 587 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 CASP8AP2Q9UKL3 1982 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 LYRM1O43325 122 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 PIP5K1CO60331 668 aa10.97□□□□□ -0.65
TRA2B-214ENST00000487615 PLGP00747 810 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms