RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 FAM26EQ8N5C1 309 aa17.68■□□□□ 0.42
SEC22A-208ENST00000487572 REXO5Q96IC2 774 aaKnown RBP17.68■□□□□ 0.42
SEC22A-208ENST00000487572 ARMC7Q9H6L4 198 aa17.68■□□□□ 0.42
SEC22A-208ENST00000487572 TMEM185BQ9H7F4 350 aa17.68■□□□□ 0.42
SEC22A-208ENST00000487572 GMPR2Q9P2T1 348 aaKnown RBP17.68■□□□□ 0.42
SEC22A-208ENST00000487572 GCN1Q92616 2671 aaKnown RBP17.68■□□□□ 0.42
SEC22A-208ENST00000487572 MYO18BQ8IUG5 2567 aa17.68■□□□□ 0.42
SEC22A-208ENST00000487572 DNAJC13O75165 2243 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 RELNP78509 3460 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 C7orf72A4D263 438 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 CFAP73A6NFT4 308 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 FAM220BPB1ANY3 271 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 LINC01387J3KSC0 135 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 FRS3O43559 492 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 ADAM11O75078 769 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 SERPINB7O75635 380 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 OPN1SWP03999 348 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 OPN1LWP04000 364 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 PEPDP12955 493 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 ZNF708P17019 499 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 IL11P20809 199 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 EIF1P41567 113 aaKnown RBP17.67■□□□□ 0.42
SEC22A-208ENST00000487572 SLC6A8P48029 635 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 PER3P56645 1201 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 CLDN18P56856 261 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 MXRA7P84157 204 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 LIPEQ05469 1076 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 C1orf185Q5T7R7 199 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 C8orf82Q6P1X6 216 aaPredicted RBP17.67■□□□□ 0.42
SEC22A-208ENST00000487572 POMZP3Q6PJE2 187 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 EID3Q8N140 333 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 OR2T12Q8NG77 320 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 CCDC120Q96HB5 630 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 CHST2Q9Y4C5 530 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 PCNX3Q9H6A9 2034 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 POLEQ07864 2286 aa17.67■□□□□ 0.42
SEC22A-208ENST00000487572 TENM4Q6N022 2769 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 HELZ2Q9BYK8 2649 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 E9PLN8 166 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 H0YC42 278 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 M0QX08 132 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 NME4O00746 187 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TPST1O60507 370 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 DNAJA2O60884 412 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 GCM2O75603 506 aaPredicted RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 GABRA1P14867 456 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 CPN1P15169 458 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ME2P23368 584 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 PSMA4P25789 261 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 PRKAR1BP31321 381 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 IDH2P48735 452 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TPD52P55327 224 aaPredicted RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 CLDN20P56880 219 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 PCBP3P57721 371 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 SESN3P58005 492 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 DMTNQ08495 405 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 KRT72Q14CN4 511 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ZSWIM7Q19AV6 140 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 INTS11Q5TA45 600 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 RTL6Q6ICC9 239 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ERICH5Q6P6B1 374 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 RPTNQ6XPR3 784 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 PATL1Q86TB9 770 aaKnown RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ZNF440Q8IYI8 595 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 MARVELD2Q8N4S9 558 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 MEIOBQ8N635 442 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 SMYD1Q8NB12 490 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ATP6V1C2Q8NEY4 427 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TMEM234Q8WY98 164 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 ST8SIA1Q92185 356 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 MRGPRX4Q96LA9 322 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TRIB1Q96RU8 372 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 VKORC1Q9BQB6 163 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 TUBA1CQ9BQE3 449 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 RSPO3Q9BXY4 272 aaPredicted RBP17.66■□□□□ 0.42
SEC22A-208ENST00000487572 AP3M1Q9Y2T2 418 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 FAM215AQ9Y5M1 114 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 AP4B1Q9Y6B7 739 aa17.66■□□□□ 0.42
SEC22A-208ENST00000487572 PRORSD1PA6NEY8 169 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 AHRRA9YTQ3 701 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 KDM4EB2RXH2 506 aaPredicted RBP17.65■□□□□ 0.42
SEC22A-208ENST00000487572 MFN2O95140 757 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 GP1BBP13224 206 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 PRG2P13727 222 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 UQCRBP14927 111 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 SUCLG1P53597 346 aaKnown RBP17.65■□□□□ 0.42
SEC22A-208ENST00000487572 MERTKQ12866 999 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 EPS8Q12929 822 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 BCL2A1Q16548 175 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 ACSF3Q4G176 576 aaPredicted RBP17.65■□□□□ 0.42
SEC22A-208ENST00000487572 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 DHRS4L2Q6PKH6 230 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 B3GNT6Q6ZMB0 384 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 ZNF550Q7Z398 422 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 COMTD1Q86VU5 262 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 MICU2Q8IYU8 434 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 SLC26A7Q8TE54 656 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 DMRTA2Q96SC8 542 aa17.65■□□□□ 0.42
SEC22A-208ENST00000487572 ADA2Q9NZK5 511 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms