RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ANXA3P12429 323 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 ACADSP16219 412 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 XRCC1P18887 633 aaPredicted RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 IDSP22304 550 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 HTR2AP28223 471 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 SOX6P35712 828 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 OSTNP61366 133 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 SNTB2Q13425 540 aaKnown RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 PPP1R3AQ16821 1122 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 MICAQ29983 383 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 CYS1Q717R9 158 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 CEACAM19Q7Z692 300 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 APOBEC3FQ8IUX4 373 aaKnown RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 OR5AU1Q8NGC0 362 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 OR2T34Q8NGX1 318 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 C18orf25Q96B23 403 aaPredicted RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 ZBED6CLQ96FA7 236 aaPredicted RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 C9orf85Q96MD7 179 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 NFKBIZQ9BYH8 718 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 UBXN6Q9BZV1 441 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 COMMD4Q9H0A8 199 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 SLC25A51Q9H1U9 297 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 RHOJQ9H4E5 214 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 POLD4Q9HCU8 107 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 TIGARQ9NQ88 270 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 FAM120CQ9NX05 1096 aaKnown RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 DUSP12Q9UNI6 340 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 RNF6Q9Y252 685 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 EIF3LQ9Y262 564 aaKnown RBP3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 NTNG1Q9Y2I2 539 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 DNAH12Q6ZR08 3092 aa3.87□□□□□ -1.79
PRPF38A-203ENST00000487160 FAM74A7A6NL05 159 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ANGPT2O15123 496 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 DUX1O43812 170 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 LCMT2O60294 686 aaKnown RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 IDH1O75874 414 aaKnown RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 KBTBD11O94819 623 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 MFN2O95140 757 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ANP32DO95626 131 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 TBX6O95947 436 aaPredicted RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 HPP00738 406 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 KRT8P05787 483 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ALPIP09923 528 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 CCL5P13501 91 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 SDC1P18827 310 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 EIF2S2P20042 333 aaKnown RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 DRD5P21918 477 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 EMDP50402 254 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ARHGDIBP52566 201 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 KRTAP10-9P60411 292 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 RPS8P62241 208 aaKnown RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 PLOD1Q02809 727 aaPredicted RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 SLC10A1Q14973 349 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 CCDC57Q2TAC2 916 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 NADK2Q4G0N4 442 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 FAM74A3Q4VXF1 159 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 HSP90AB3PQ58FF7 597 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 CES3Q6UWW8 571 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ZNF600Q6ZNG1 722 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 LANCL3Q6ZV70 420 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 COPS6Q7L5N1 327 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 PARGQ86W56 976 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ERICH1Q86X53 443 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 GMCL1P1Q8NEA9 526 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 OR2L2Q8NH16 312 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 SPATA3Q8NHX4 192 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 FAM222BQ8WU58 562 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 OPTNQ96CV9 577 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 VPS39Q96JC1 886 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 CASD1Q96PB1 797 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 MYCBPQ99417 103 aaPredicted RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 TMEM121Q9BTD3 319 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 DEFB129Q9H1M3 183 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 FARSBQ9NSD9 589 aaKnown RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ELOVL2Q9NXB9 296 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 ZNF581Q9P0T4 197 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 SF3B1O75533 1304 aaKnown RBP eCLIP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 MYO3BQ8WXR4 1341 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 MED23Q9ULK4 1368 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 PLXNB2O15031 1838 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 PHIPQ8WWQ0 1821 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 DOCK2Q92608 1830 aa3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
PRPF38A-203ENST00000487160 CCL15-CCL14A0A0B4J2E2 113 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 TRIM49BA6NDI0 452 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 ZNF840PA6NDX5 716 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 ZSCAN5BA6NJL1 495 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 PRAMEF12O95522 483 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 GATA1P15976 413 aaPredicted RBP3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 BCL3P20749 454 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 GATA2P23769 480 aaPredicted RBP3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 IGFBP5P24593 272 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 OR1D4P47884 311 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 ACADVLP49748 655 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 IST1P53990 364 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 CNTN2Q02246 1040 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 IL18R1Q13478 541 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 CHI3L2Q15782 390 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 MAPK6Q16659 721 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 CCL15Q16663 113 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms