RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PRKCDQ05655 676 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TRIP6Q15654 476 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 EXT1Q16394 746 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ALG10BQ5I7T1 473 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FNDC7Q5VTL7 733 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SLX4IPQ5VYV7 408 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 C12orf73Q69YU5 71 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 WBP2NLQ6ICG8 309 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RPL13AP3Q6NVV1 102 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF773Q6PK81 442 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF517Q6ZMY9 492 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 Q6ZPB1 254 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PTCHD4Q6ZW05 846 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 GLRX5Q86SX6 157 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SLCO6A1Q86UG4 719 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 MISPQ8IVT2 679 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 NRMQ8IXM6 262 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PRR22Q8IZ63 422 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CADM2Q8N3J6 435 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TMCO5AQ8N6Q1 288 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CLDN22Q8N7P3 220 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 APCDD1LQ8NCL9 501 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FAM71CQ8NEG0 241 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 OR2Y1Q8NGV0 311 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RHOXF1Q8NHV9 184 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CNIH3Q8TBE1 160 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SLC22A8Q8TCC7 542 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 GRHL3Q8TE85 626 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TMEM255BQ8WV15 326 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TRUB1Q8WWH5 349 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 IPCEF1Q8WWN9 437 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 OSTF1Q92882 214 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TMCO6Q96DC7 493 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 FAM46AQ96IP4 442 aaKnown RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 Q96MT0 163 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 LMF1Q96S06 567 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 WDR77Q9BQA1 342 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PRSS27Q9BQR3 290 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 DEFB126Q9BYW3 111 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 LAT2Q9GZY6 243 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 ZNF700Q9H0M5 742 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 AKIRIN1Q9H9L7 192 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-206ENST00000487062 SLC25A19Q9HC21 320 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 HHATLQ9HCP6 504 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RASSF1Q9NS23 344 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 CLN6Q9NWW5 311 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 RNF6Q9Y252 685 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 PCDHGA3Q9Y5H0 932 aa6.47□□□□□ -1.37
SF3A3-206ENST00000487062 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SH3D21A4FU49 640 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 UNC119BA6NIH7 251 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 ALG1L2C9J202 215 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PTGES3LE9PB15 166 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PRKNO60260 465 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PIP5K1CO60331 668 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 BCAS1O75363 584 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 OR6B1O95007 311 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 RCBTB2O95199 551 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 LYPD3O95274 346 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SOX14O95416 240 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 DLGAP3O95886 979 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 THY1P04216 161 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TFAP2AP05549 437 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PNMTP11086 282 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 IFI30P13284 250 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 BMP7P18075 431 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TCN2P20062 427 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PGCP20142 388 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 NBL1P41271 181 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 ALDH3B2P48448 385 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 GIPRP48546 466 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CCR4P51679 360 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CTBP2P56545 445 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 FOXL2P58012 376 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SNRPGP62308 76 aaKnown RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 RPS15P62841 145 aaKnown RBP6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CDK5Q00535 292 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PLAURQ03405 335 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TCF15Q12870 199 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SKP2Q13309 424 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 GINS1Q14691 196 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PCOLCEQ15113 449 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 BTBD16Q32M84 506 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 NADK2Q4G0N4 442 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 HES3Q5TGS1 186 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 STPG1Q5TH74 334 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TMEM236Q5W0B7 351 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SLC27A4Q6P1M0 643 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 DHRS13Q6UX07 377 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 TMPRSS11FQ6ZWK6 438 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 NUP54Q7Z3B4 507 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 PIP4P1Q86T03 277 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 CYP4Z2PQ8N1L4 340 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SLC43A2Q8N370 569 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SVOPQ8N4V2 548 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 ESX1Q8N693 406 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 SLC15A4Q8N697 577 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 GATSQ8NAP1 163 aa6.46□□□□□ -1.38
SF3A3-206ENST00000487062 POGLUT1Q8NBL1 392 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms