RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 MS4A14Q96JA4 679 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 ZNF48Q96MX3 618 aaPredicted RBP13.13□□□□□ -0.31
U2AF1-211ENST00000486519 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 MMP27Q9H306 513 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 Q9N2J8 555 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 ASB6Q9NWX5 421 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 MALT1Q9UDY8 824 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
U2AF1-211ENST00000486519 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
U2AF1-211ENST00000486519 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 DNALI1O14645 258 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 GUCY1B2O75343 617 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 ESRRBO95718 433 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 ELK4P28324 431 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 ZNF117Q03924 483 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 ZP4Q12836 540 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 NDUFAF6Q330K2 333 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 TCHHL1Q5QJ38 904 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 CBLN3Q6UW01 205 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 B4GALNT2Q8NHY0 566 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 APH1AQ96BI3 265 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 NSUN5Q96P11 429 aaKnown RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 FAIM2Q9BWQ8 316 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 SENP1Q9P0U3 644 aa13.12□□□□□ -0.31
U2AF1-211ENST00000486519 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
U2AF1-211ENST00000486519 LOC100653049A0A140TA62 436 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 ZNF716A6NP11 495 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 COQ9O75208 318 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 KRT34O76011 436 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 JUNP05412 331 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 STMN1P16949 149 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 HGFACQ04756 655 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 TRAF3Q13114 568 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 HIKESHIQ53FT3 197 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 ABLIM2Q6H8Q1 611 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 RPS27LQ71UM5 84 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 GPR22Q99680 433 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 SLC35C2Q9NQQ7 365 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
U2AF1-211ENST00000486519 NOSIPQ9Y314 301 aaKnown RBP13.11□□□□□ -0.31
U2AF1-211ENST00000486519 PIN1P1O15428 100 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 PLPP2O43688 288 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 TSPAN15O95858 294 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 PDYNP01213 254 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 TFP02787 698 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 ADRA2AP08913 450 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 CHN1P15882 459 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 THBS4P35443 961 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 GP5P40197 560 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
U2AF1-211ENST00000486519 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 OR7E24Q6IFN5 339 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 FBXO30Q8TB52 745 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 NANPQ8TBE9 248 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 OTUB1Q96FW1 271 aaPredicted RBP13.1□□□□□ -0.31
U2AF1-211ENST00000486519 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 EQTNQ9NQ60 294 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
U2AF1-211ENST00000486519 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 A0A087WV62 115 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 HPXP02790 462 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 PRKCAP17252 672 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 IVDP26440 423 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 SLC7A1P30825 629 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 EIF1P41567 113 aaKnown RBP13.09□□□□□ -0.31
U2AF1-211ENST00000486519 TUBA1BP68363 451 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 TUBA4AP68366 448 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 TTC19Q6DKK2 380 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-211ENST00000486519 TUBA1AQ71U36 451 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 DOK3Q7L591 496 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 SPATA21Q7Z572 469 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 OR2L13Q8N349 312 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 TSPAN17Q96FV3 270 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 QRSL1Q9H0R6 528 aaKnown RBP13.09□□□□□ -0.31
U2AF1-211ENST00000486519 NTN4Q9HB63 628 aa13.09□□□□□ -0.31
U2AF1-211ENST00000486519 FBXO9Q9UK97 447 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-211ENST00000486519 SOX21Q9Y651 276 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-211ENST00000486519 GJE1A6NN92 205 aa13.08□□□□□ -0.32
U2AF1-211ENST00000486519 MYO1GB0I1T2 1018 aa13.08□□□□□ -0.32
U2AF1-211ENST00000486519 PPP6CO00743 305 aa13.08□□□□□ -0.32
U2AF1-211ENST00000486519 MPZL1O95297 269 aa13.08□□□□□ -0.32
U2AF1-211ENST00000486519 NGFRP08138 427 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms