RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 OR6C65A6NJZ3 312 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 EFCAB7A8K855 629 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 OR7A17O14581 309 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 MSH4O15457 936 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 GPAA1O43292 621 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 IL1BP01584 269 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 IGHV3-9P01782 118 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 WNT2P09544 360 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 XRCC1P18887 633 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 FASP25445 335 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 CDH5P33151 784 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 RPL4P36578 427 aaKnown RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 UCNP55089 124 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 RND3P61587 244 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 OTUD4Q01804 1114 aaKnown RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 TNFRSF17Q02223 184 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 PLOD1Q02809 727 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 ZNF33BQ06732 778 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 CHI3L2Q15782 390 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 PPP1R3AQ16821 1122 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 MICAQ29983 383 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 ISXQ2M1V0 245 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 C17orf58Q2M2W7 97 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 SEL1L2Q5TEA6 688 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 KHDRBS2Q5VWX1 349 aaKnown RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 CGB2Q6NT52 195 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 NANOGNBQ7Z5D8 188 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 MOB3BQ86TA1 216 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 BPIFB2Q8N4F0 458 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 Q8N9G6 341 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 RFESDQ8TAC1 157 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 C18orf25Q96B23 403 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 CNDP1Q96KN2 507 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 AMDHD1Q96NU7 426 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 SLC6A7Q99884 636 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 GCOM2Q9BZD3 368 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 UFSP2Q9NUQ7 469 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 ZNF446Q9NWS9 450 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 HYPKQ9NX55 129 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 UTP6Q9NYH9 597 aaKnown RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 RCOR3Q9P2K3 495 aaPredicted RBP2.88□□□□□ -1.95
SMC4-215ENST00000484799 PCSK1NQ9UHG2 260 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 ABCG2Q9UNQ0 655 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 FRMPD4Q14CM0 1322 aa2.88□□□□□ -1.95
SMC4-215ENST00000484799 XKRY2A2RUG3 117 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 METTL21EPA6NDL7 271 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 UGT2B17O75795 530 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 LRATO95237 230 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 IGHG3P01860 377 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 ZNF853P0CG23 659 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 POU3F4P49335 361 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 NOVA1P51513 510 aaKnown RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 P2RY4P51582 365 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 STX17P56962 302 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 EWSR1Q01844 656 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMC4-215ENST00000484799 TEX44Q53QW1 395 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 ZNF658Q5TYW1 1059 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 WSCD1Q658N2 575 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 C2orf66Q6UXQ4 117 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 CYS1Q717R9 158 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 KIAA1328Q86T90 577 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 NBPF5PQ86XG9 351 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 VSTM4Q8IW00 320 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 DHRSXQ8N5I4 330 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 OR4D5Q8NGN0 318 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 PIGCQ92535 297 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 C12orf66Q96MD2 445 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 RPRD1AQ96P16 312 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 RANBP9Q96S59 729 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 TMEM121Q9BTD3 319 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 HCAR1Q9BXC0 346 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 OPN3Q9H1Y3 402 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 TM9SF3Q9HD45 589 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 NMRK1Q9NWW6 199 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 IMPAD1Q9NX62 359 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 RPS6KB2Q9UBS0 482 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 ZNF221Q9UK13 617 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 PTBP2Q9UKA9 531 aaKnown RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 CDH9Q9ULB4 789 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 RASD1Q9Y272 281 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 OARD1Q9Y530 152 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 COL4A4P53420 1690 aaPredicted RBP2.87□□□□□ -1.95
SMC4-215ENST00000484799 METP08581 1390 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 TNRQ92752 1358 aa2.87□□□□□ -1.95
SMC4-215ENST00000484799 ZSCAN5BA6NJL1 495 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 CCT8L1PA6NM43 557 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 TAPBPO15533 448 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 FCMRO60667 390 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 PNMTP11086 282 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 ZNF32P17041 273 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 LAP3P28838 519 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 HPCAL1P37235 193 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 BDKRB1P46663 353 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 CDH4P55283 916 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 ACTR3P61158 418 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 RAB40BQ12829 278 aa2.86□□□□□ -1.95
SMC4-215ENST00000484799 IDI1Q13907 227 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms