RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 COMMD1Q8N668 190 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 CSGALNACT2Q8N6G5 542 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 SPATA4Q8NEY3 305 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 RAET1EQ8TD07 263 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 PIGCQ92535 297 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 RPL3LQ92901 407 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 RAB3CQ96E17 227 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF396Q96N95 335 aaPredicted RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 FAM210AQ96ND0 272 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 DEFB118Q96PH6 123 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 TRIM9Q9C026 710 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 IQCGQ9H095 443 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 TDRD3Q9H7E2 651 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 AUNIPQ9H7T9 357 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ELOVL3Q9HB03 270 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 ADGRL4Q9HBW9 690 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 UBAP1Q9NZ09 502 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 PDP1Q9P0J1 537 aaPredicted RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 LHX3Q9UBR4 397 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 PEF1Q9UBV8 284 aaKnown RBP2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 RSPH14Q9UHP6 348 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 BCAP29Q9UHQ4 241 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 IKZF3Q9UKT9 509 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 KANK1Q14678 1352 aa2.98□□□□□ -1.93
SMARCA1-204ENST00000478420 AKNAQ7Z591 1439 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 IGHV3OR16-12A0A075B7B8 117 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 LOC100506127A0A0U1RQW1 187 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 TRABD2BA6NFA1 517 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 WASHC1A8K0Z3 465 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 E9PMD0 336 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 SGK494L7N484 410 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 YKT6O15498 198 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 RRP8O43159 456 aaKnown RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 ZSCAN12O43309 604 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 YEATS4O95619 227 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 KRT6AP02538 564 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 GSTA1P08263 222 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 ALPIP09923 528 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 UMPSP11172 480 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 NT5EP21589 574 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 U2AF2P26368 475 aaKnown RBP eCLIP2.97□□□□□ -1.931e-6■■□□□ 12.1
SMARCA1-204ENST00000478420 ANXA13P27216 316 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CYLC1P35663 651 aaPredicted RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 RPS5P46782 204 aaKnown RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 NAPAP54920 295 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CUL1Q13616 776 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CLPPQ16740 277 aaPredicted RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 PPP1R3AQ16821 1122 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 ALKBH6Q3KRA9 238 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 Q3ZCU0 254 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 LINC01620Q4KN68 170 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 OLFML2AQ68BL7 652 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 DEGS2Q6QHC5 323 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 WASH2PQ6VEQ5 465 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 STOX1Q6ZVD7 989 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 FAM9CQ8IZT9 166 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 TMEM123Q8N131 208 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CD177Q8N6Q3 437 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 LINC00469Q8N7U9 141 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 COLGALT1Q8NBJ5 622 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 TSEN15Q8WW01 171 aaKnown RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 SPRYD4Q8WW59 207 aaPredicted RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CRYGNQ8WXF5 182 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 MCUR1Q96AQ8 359 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 HAVCR1Q96D42 359 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 SERAC1Q96JX3 654 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 VSTM2LQ96N03 204 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CPXM1Q96SM3 734 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 WRAP53Q9BUR4 548 aaKnown RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 GPR174Q9BXC1 333 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 TMEM185BQ9H7F4 350 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 ANKRA2Q9H9E1 313 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 NRN1Q9NPD7 142 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 KLHL28Q9NXS3 571 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 CDH9Q9ULB4 789 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 VSIG4Q9Y279 399 aa2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 KLF2Q9Y5W3 355 aaPredicted RBP2.97□□□□□ -1.93
SMARCA1-204ENST00000478420 SYNJ2O15056 1496 aa2.96□□□□□ -1.93
SMARCA1-204ENST00000478420 ATP10DQ9P241 1426 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NPIPA5A0A0B4J1W7 369 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 TTC26A0AVF1 554 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 GABRR3A8MPY1 467 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NPIPA5E9PKD4 350 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 K7ERQ8 282 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 EI24O14681 340 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 JAK2O60674 1132 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 TRIM3O75382 744 aaPredicted RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NDUFA7O95182 113 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 GNA14O95837 355 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 OAS1P00973 400 aaKnown RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NCK1P16333 377 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 SRMP19623 302 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 SAA4P35542 130 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 KRTAP10-3P60369 221 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 RPS15P62841 145 aaKnown RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 BDH1Q02338 343 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 NME3Q13232 169 aa2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 EXOSC2Q13868 293 aaKnown RBP2.96□□□□□ -1.94
SMARCA1-204ENST00000478420 MICAQ29983 383 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms