RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 HENMT1Q5T8I9 393 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 LRRC66Q68CR7 880 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 SLC25A25Q6KCM7 469 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 CNSTQ6PJW8 725 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 CDHR3Q6ZTQ4 885 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 PHLDB2Q86SQ0 1253 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 HOOK3Q86VS8 718 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 BBS5Q8N3I7 341 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 PHLDA1Q8WV24 401 aaPredicted RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 DYRK2Q92630 601 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 RNASE6Q93091 150 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 CCDC47Q96A33 483 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 SPACA9Q96E40 222 aaPredicted RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 NSMCE3Q96MG7 304 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 UTP23Q9BRU9 249 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 XPO4Q9C0E2 1151 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 OR2AG1Q9H205 316 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 P2RY12Q9H244 342 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 BLZF1Q9H2G9 400 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 YAE1D1Q9NRH1 226 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 TAB2Q9NYJ8 693 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 ARMCX1Q9P291 453 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 CRNNQ9UBG3 495 aaPredicted RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 DHCR7Q9UBM7 475 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 GNPTGQ9UJJ9 305 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 EXOGQ9Y2C4 368 aaKnown RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 ANKRD36A6QL64 1941 aa3.91□□□□□ -1.78
VPS50-214ENST00000477935 HRNRQ86YZ3 2850 aaPredicted RBP3.91□□□□□ -1.78
VPS50-214ENST00000477935 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 A0A1B0GX78 115 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 ANKRD61A6NGH8 418 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 GOLGA8SH3BPF8 625 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 KLRC4O43908 158 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 KHDRBS3O75525 346 aaKnown RBP3.9□□□□□ -1.79
VPS50-214ENST00000477935 DFFBO76075 338 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 CDK14O94921 469 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 TRBC1P01850 177 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 IGHV4-31P0DP07 118 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 NR2F1P10589 423 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 HLA-DPA1P20036 260 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PTPN3P26045 913 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 SLC6A12P48065 614 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 SPINT3P49223 89 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 LMAN1P49257 510 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 DEFA6Q01524 100 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 IL10RBQ08334 325 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 XRCC4Q13426 336 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 OR1C1Q15619 314 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 SNAPC1Q16533 368 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 KLHL26Q53HC5 615 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 ANKRD20A8PQ5CZ79 823 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 RFLNAQ6ZTI6 216 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 STRADAQ7RTN6 431 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 NLRP9Q7RTR0 991 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 RTN4RL2Q86UN3 420 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 AMZ2Q86W34 360 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 ZNF614Q8N883 585 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 MDS2Q8NDY4 140 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 OR4E2Q8NGC2 313 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 CFAP61Q8NHU2 1237 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 BRSK1Q8TDC3 778 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PIH1D2Q8WWB5 315 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 NTAN1Q96AB6 310 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 SPDL1Q96EA4 605 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 TTC25Q96NG3 672 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 LYSMD1Q96S90 227 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 TTYH2Q9BSA4 534 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 ZSCAN5AQ9BUG6 496 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 WNT5BQ9H1J7 359 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 GOLPH3LQ9H4A5 285 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 OPA3Q9H6K4 179 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 LRRC19Q9H756 370 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 KIR3DX1Q9H7L2 352 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 Q9N2K0 584 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 SPHK1Q9NYA1 384 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PKD2L2Q9NZM6 624 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 MTRF1LQ9UGC7 380 aaKnown RBP3.9□□□□□ -1.79
VPS50-214ENST00000477935 ARMCX3Q9UH62 379 aaPredicted RBP3.9□□□□□ -1.79
VPS50-214ENST00000477935 SLC24A2Q9UI40 661 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PLCL2Q9UPR0 1127 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 NEU3Q9UQ49 428 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 WDR37Q9Y2I8 494 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 HEBP2Q9Y5Z4 205 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PRSS21Q9Y6M0 314 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 DOCK4Q8N1I0 1966 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 TRRAPQ9Y4A5 3859 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 PCM1Q15154 2024 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 MPDZO75970 2070 aa3.9□□□□□ -1.79
VPS50-214ENST00000477935 IGHV1-45A0A0A0MS14 117 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 MSGN1A6NI15 193 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 A8MUI8 341 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 C2orf74A8MZ97 194 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 KLRC4-KLRK1H3BQV0 150 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 BCKDKO14874 412 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 CASKO14936 926 aa3.89□□□□□ -1.79
VPS50-214ENST00000477935 TFECO14948 347 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms