RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 M0R129 80 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 NDUFB5O43674 189 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 CHP2O43745 196 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 SCO2O43819 266 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 GMFGO60234 142 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 IGHEP01854 428 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 LINGO3P0C6S8 592 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 FUT1P19526 365 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 MAKP20794 623 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 POU1F1P28069 291 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 IDH2P48735 452 aaKnown RBP13.21□□□□□ -0.29
COL4A6-206ENST00000477085 GAS1P54826 345 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 ESRRGP62508 458 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 RPS15P62841 145 aaKnown RBP13.21□□□□□ -0.29
COL4A6-206ENST00000477085 PSPHP78330 225 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 GABREP78334 506 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 IL5RAQ01344 420 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 COX10Q12887 443 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 TSPAN31Q12999 210 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
COL4A6-206ENST00000477085 ALG10BQ5I7T1 473 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 C6orf141Q5SZD1 244 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 RNF217Q8TC41 542 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 ZNF226Q9NYT6 803 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 SCOCQ9UIL1 159 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 ICAM5Q9UMF0 924 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 RNF6Q9Y252 685 aa13.21□□□□□ -0.29
COL4A6-206ENST00000477085 RIF1Q5UIP0 2472 aaKnown RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 OR6B1O95007 311 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 FBXO45P0C2W1 286 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 CEACAM1P13688 526 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 NAGAP17050 411 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 GABRB1P18505 474 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 TPD52P55327 224 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 APOFQ13790 326 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 MAD2L1BPQ15013 274 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF791Q3KP31 576 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ULK3Q6PHR2 472 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF440Q8IYI8 595 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 OR10G3Q8NGC4 313 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 OR8D4Q8NGM9 314 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 DUSP19Q8WTR2 217 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 NKD1Q969G9 470 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 C3orf49Q96BT1 292 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 GPR87Q9BY21 358 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 B3GNT4Q9C0J1 378 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ING2Q9H160 280 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 GALNT9Q9HCQ5 603 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 RASSF1Q9NS23 344 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 IL17BQ9UHF5 180 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 FBXL4Q9UKA2 621 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 CDRT15L2A8MXV6 281 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 C21orf140B9A014 251 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 STMND1H3BQB6 276 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 GNB5O14775 395 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 HCRTR2O43614 444 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ITGA10O75578 1167 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 FPR3P25089 353 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 PTGDSP41222 190 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 ALDH6A1Q02252 535 aaKnown RBP13.2□□□□□ -0.3
COL4A6-206ENST00000477085 PRKCDQ05655 676 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 EFR3AQ14156 821 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 KCTD21Q4G0X4 260 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 RRM2BQ7LG56 351 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 CCDC103Q8IW40 242 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 IQCF1Q8N6M8 205 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 APOL4Q9BPW4 351 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 HSPE1-MOB4S4R3N1 261 aa13.2□□□□□ -0.3
COL4A6-206ENST00000477085 KNTC1P50748 2209 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 IGKV1D-42A0A075B6H8 117 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 A0A087WUJ7 227 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 DPPA5A6NC42 116 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 H3BN98 237 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 TFAP2AP05549 437 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 CRHBPP24387 322 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 FMO3P31513 532 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 IFNGR2P38484 337 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 SOX3P41225 446 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 NOVA1P51513 510 aaKnown RBP13.19□□□□□ -0.3
COL4A6-206ENST00000477085 CCR4P51679 360 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 RPS6KA3P51812 740 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 FXYD6P3P58550 94 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 CDK5Q00535 292 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 TGIF1Q15583 401 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 NTRK2Q16620 822 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 SLX4IPQ5VYV7 408 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms