RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GPR137Q96N19 417 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 CDRT15Q96T59 188 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SH3GL1Q99961 368 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ECSITQ9BQ95 431 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 OR2B2Q9GZK3 357 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 LAT2Q9GZY6 243 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SLC6A15Q9H2J7 730 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ACKR4Q9NPB9 350 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 DNAJB12Q9NXW2 375 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 PPP4R1LQ9P1A2 415 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SPRR3Q9UBC9 169 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 BOKQ9UMX3 212 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF443Q9Y2A4 671 aaPredicted RBP6.33□□□□□ -1.4
LIMD1-204ENST00000474665 SLC6A5Q9Y345 797 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 RTTNQ86VV8 2226 aa6.33□□□□□ -1.4
LIMD1-204ENST00000474665 AKAP6Q13023 2319 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 C15orf38-AP3S2A0A0A6YYH1 394 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 A0A1B0GTH9 108 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ANKUB1A6NFN9 424 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 AP3D1O14617 1153 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 TFECO14948 347 aaPredicted RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF264O43296 627 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CDC40O60508 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CBR3O75828 277 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CSTAP01040 98 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OPN1SWP03999 348 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 DBIP07108 87 aaKnown RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 THBS1P07996 1170 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PABPC4LP0CB38 370 aaKnown RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 UBTFL6P0CB48 400 aaPredicted RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 GKN3PP0CG01 181 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 UBL4AP11441 157 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 HSD17B1P14061 328 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 FUT4P22083 530 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CALB2P22676 271 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 TCEA1P23193 301 aaKnown RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 DPP4P27487 766 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 GDF1P27539 372 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 SRD5A2P31213 254 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PTGER4P35408 488 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 GFRA1P56159 465 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 DLX5P56178 289 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CLDN15P56746 228 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 HPCAP84074 193 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 HOXC5Q00444 222 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PLGLB1Q02325 96 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 VEZF1Q14119 521 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 SLC10A1Q14973 349 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PLPPR5Q32ZL2 321 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 RNF220Q5VTB9 566 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 DHRS4L2Q6PKH6 230 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 EIF3MQ7L2H7 374 aaKnown RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ARPINQ7Z6K5 226 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 IFNEQ86WN2 208 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 GRAMD2AQ8IUY3 354 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 LACC1Q8IV20 430 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 SMYD1Q8NB12 490 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF527Q8NB42 609 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OR2T12Q8NG77 320 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OR4K17Q8NGC6 315 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OR4D11Q8NGI4 311 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OR5M1Q8NGP8 315 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OR10Q1Q8NGQ4 319 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 WDR60Q8WVS4 1066 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 OIT3Q8WWZ8 545 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CLPTM1LQ96KA5 538 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 PRR14Q9BWN1 585 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 SPATA9Q9BWV2 254 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ALG2Q9H553 416 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 SPAG4Q9NPE6 437 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 MED17Q9NVC6 651 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 QPCTLQ9NXS2 382 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 CALML5Q9NZT1 146 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ZNF835Q9Y2P0 537 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 MRPS18CQ9Y3D5 142 aaKnown RBP6.32□□□□□ -1.4
LIMD1-204ENST00000474665 TACC2O95359 2948 aa6.32□□□□□ -1.4
LIMD1-204ENST00000474665 ELOVL7A1L3X0 281 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 OR2M5A3KFT3 312 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 KDM4EB2RXH2 506 aaPredicted RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 C5orf58C9J3I9 102 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 H0YC42 278 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 GTPBP1O00178 669 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 SUSD5O60279 629 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 EIF4E2O60573 245 aaKnown RBP6.31□□□□□ -1.4
LIMD1-204ENST00000474665 HCN1O60741 890 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 TRAPPC6AO75865 159 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 EDN3P14138 238 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 HPGDP15428 266 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 NCK1P16333 377 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 IL7RP16871 459 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 PRKCAP17252 672 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 BMP7P18075 431 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 GGT1P19440 569 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 HTR2AP28223 471 aa6.31□□□□□ -1.4
LIMD1-204ENST00000474665 MSX1P28360 303 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms