RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SH3D21A4FU49 640 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 UNC119BA6NIH7 251 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 TSPAN2O60636 221 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 ZNF354AO60765 605 aaPredicted RBP16.52■□□□□ 0.23
VARS2-206ENST00000473916 TRMUO75648 421 aaKnown RBP16.52■□□□□ 0.23
VARS2-206ENST00000473916 SLC2A10O95528 541 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 PTHP01270 115 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 HPGDP15428 266 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 ACP1P24666 158 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 ABCD3P28288 659 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 CCR4P51679 360 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 EMP2P54851 167 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 ZNF91Q05481 1191 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 PLCXD2Q0VAA5 305 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 SKP2Q13309 424 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 TUBA3CQ13748 450 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 MRGPREQ86SM8 312 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 SVOPQ8N4V2 548 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 OMA1Q96E52 524 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 ZNF426Q9BUY5 554 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 MED31Q9Y3C7 131 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 CDH10Q9Y6N8 788 aa16.52■□□□□ 0.23
VARS2-206ENST00000473916 A0A1W2PPW3 197 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 PMS2P1A4D2B8 440 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 SCDO00767 359 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 TBXA2RP21731 343 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 IL12BP29460 328 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 LSAMPQ13449 338 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 IL11RAQ14626 422 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 THSD4Q6ZMP0 1018 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 FAM26EQ8N5C1 309 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 TMCO5AQ8N6Q1 288 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 ZNF420Q8TAQ5 688 aaPredicted RBP16.51■□□□□ 0.23
VARS2-206ENST00000473916 FANK1Q8TC84 345 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 TRUB1Q8WWH5 349 aaKnown RBP16.51■□□□□ 0.23
VARS2-206ENST00000473916 SH3YL1Q96HL8 342 aaPredicted RBP16.51■□□□□ 0.23
VARS2-206ENST00000473916 ZNF582Q96NG8 517 aaPredicted RBP16.51■□□□□ 0.23
VARS2-206ENST00000473916 CRB3Q9BUF7 120 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 OR52D1Q9H346 318 aa16.51■□□□□ 0.23
VARS2-206ENST00000473916 SAGE2PA6NJ88 616 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 LRRN3E7EW58 273 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 CPNE3O75131 537 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 APOL3O95236 402 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 ZNF883P0CG24 379 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 ADORA3P0DMS8 318 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 DBTP11182 482 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 UBL4AP11441 157 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 MST1P26927 711 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 RNF4P78317 190 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 SYT6Q5T7P8 510 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 MRPL14Q6P1L8 145 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 PAPD4Q6PIY7 484 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 LINC00114Q6XXX2 140 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 MARCH3Q86UD3 253 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 RNF113BQ8IZP6 322 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 ZNF527Q8NB42 609 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 OSTF1Q92882 214 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 HHATLQ9HCP6 504 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 SLC35A3Q9Y2D2 325 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 ZNF701M0R085 212 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 CDX4O14627 284 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 TO15178 435 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 MRPS14O60783 128 aaKnown RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 ONECUT2O95948 504 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 HBQ1P09105 142 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 SAGP10523 405 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 DCAF7P61962 342 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 AQP6Q13520 282 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 TRA2AQ13595 282 aaKnown RBP eCLIP16.5■□□□□ 0.23
VARS2-206ENST00000473916 IRF3Q14653 427 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 TBCEQ15813 527 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 OCLNQ16625 522 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 CLPPQ16740 277 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 PGGHGQ32M88 737 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 UBE2UQ5VVX9 321 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 ULK3Q6PHR2 472 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 OR51A7Q8NH64 312 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 TMEM163Q8TC26 289 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 C3orf49Q96BT1 292 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 SEMA4CQ9C0C4 833 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 UBQLN3Q9H347 655 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 KRCC1Q9NPI7 259 aaPredicted RBP16.5■□□□□ 0.23
VARS2-206ENST00000473916 RPS6KB2Q9UBS0 482 aa16.5■□□□□ 0.23
VARS2-206ENST00000473916 EFCAB10A6NFE3 127 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 M0R082 166 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 SURF4O15260 269 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 WISP1O95388 367 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 CRYZQ08257 329 aaKnown RBP16.49■□□□□ 0.23
VARS2-206ENST00000473916 PLAG1Q6DJT9 500 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 TMPRSS11FQ6ZWK6 438 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 SLC34A3Q8N130 599 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 BBS1Q8NFJ9 593 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 OR5M3Q8NGP4 307 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 METTL21AQ8WXB1 218 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 YIPF6Q96EC8 236 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 HS6ST2Q96MM7 605 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 HOXD1Q9GZZ0 328 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 EVA1AQ9H8M9 152 aa16.49■□□□□ 0.23
VARS2-206ENST00000473916 ZBTB20Q9HC78 741 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms