RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 DCST2Q5T1A1 773 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TYW3Q6IPR3 259 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 IZUMO2Q6UXV1 221 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 FRRS1Q6ZNA5 592 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 SLC29A4Q7RTT9 530 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 COMTD1Q86VU5 262 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 SIRT6Q8N6T7 355 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 FAM86B1Q8N7N1 296 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 BCORP1Q8N888 145 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 C11orf65Q8NCR3 313 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 C17orf47Q8NEP4 570 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OR5AN1Q8NGI8 311 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OR10Q1Q8NGQ4 319 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OR4C3Q8NH37 302 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 THAP4Q8WY91 577 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 LRTOMTQ8WZ04 291 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 FIG4Q92562 907 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TMBIM1Q969X1 311 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZBTB8AQ96BR9 441 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 EFHD2Q96C19 240 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ASB9Q96DX5 294 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 THOC3Q96J01 351 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RASL10BQ96S79 203 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 EFHD1Q9BUP0 239 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DEFB126Q9BYW3 111 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RTN4RQ9BZR6 473 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF350Q9GZX5 532 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ING2Q9H160 280 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CDCP1Q9H5V8 836 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZBTB20Q9HC78 741 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CPNE5Q9HCH3 593 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 Q9N2J8 555 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 A4GALTQ9NPC4 353 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 P2RX2Q9UBL9 471 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CORO2BQ9UQ03 480 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CFL2Q9Y281 166 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CHST2Q9Y4C5 530 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NCOR2Q9Y618 2525 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CACNA1AO00555 2505 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 A6NL46 340 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CLDN24A6NM45 220 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NPIPB9F8W1W9 429 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 M0QX08 132 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 CXCR6O00574 342 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TO15178 435 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZZEF1O43149 2961 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 SLC28A2O43868 658 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TPST1O60507 370 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TSPAN2O60636 221 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 UGT2B11O75310 529 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 BCAS1O75363 584 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ITGA10O75578 1167 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 UGT2B17O75795 530 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 EPPINO95925 133 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OPN1SWP03999 348 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 NR2F1P10589 423 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ICAM2P13598 275 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OSMP13725 252 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 KDELR2P33947 212 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 PCGF2P35227 344 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 MAGEA8P43361 318 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 LIMS1P48059 325 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 MLF1P58340 268 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DCAF7P61962 342 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 POU6F2P78424 691 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RBBP4Q09028 425 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AIMP2Q13155 320 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 VEZF1Q14119 521 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TRIP10Q15642 601 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZNHIT3Q15649 155 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF630Q2M218 657 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DEFB109BQ30KR1 87 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 GPAT3Q53EU6 434 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AP1ARQ63HQ0 302 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TMEM200BQ69YZ2 307 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 GLYATQ6IB77 296 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 HMBOX1Q6NT76 420 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 REEP3Q6NUK4 255 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 APOOLQ6UXV4 268 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 C16orf62Q7Z3J2 963 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AMIGO2Q86SJ2 522 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 STK32CQ86UX6 486 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RPS19BP1Q86WX3 136 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 GALNT16Q8N428 558 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 COX18Q8N8Q8 333 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 LSM14AQ8ND56 463 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 DNAJC9Q8WXX5 260 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TAMM41Q96BW9 452 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OMA1Q96E52 524 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 FER1L6-AS2Q96M78 137 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 IP6K3Q96PC2 410 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 TRNT1Q96Q11 434 aaKnown RBP4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ADOQ96SZ5 270 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 WFDC6Q9BQY6 131 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 RAD21L1Q9H4I0 556 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 BCL2L10Q9HD36 194 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 ANKRD10Q9NXR5 420 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 AP3M1Q9Y2T2 418 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 OR10H1Q9Y4A9 318 aa4.33□□□□□ -1.72
SF3B1-208ENST00000470268 LRRC42Q9Y546 428 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms