RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 OR5D16Q8NGK9 328 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 OR5AK3PQ8NH89 298 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 OR2W6PQ8NHA6 318 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 EPS8L3Q8TE67 593 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 ZFP90Q8TF47 636 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 ZNF75CPQ92670 426 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 ZNF764Q96H86 408 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 C3orf30Q96M34 536 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 STACQ99469 402 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 IQCGQ9H095 443 aaKnown RBP10.86□□□□□ -0.67
HDAC3-204ENST00000469207 TIGARQ9NQ88 270 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 DUSP22Q9NRW4 184 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 GPATCH2Q9NW75 528 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 NPAP1Q9NZP6 1156 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 ATP6V1HQ9UI12 483 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 KCNE5Q9UJ90 142 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 B3GALT5Q9Y2C3 310 aa10.86□□□□□ -0.67
HDAC3-204ENST00000469207 CENPVL1A0A0U1RR11 272 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 A0A1W2PR80 420 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 RNF212BA8MTL3 300 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 SHISA9B4DS77 424 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 H3BQF6 201 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 COPEO14579 308 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 SMAD9O15198 467 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 SSX4O60224 188 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 TMCC2O75069 709 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 CYP7B1O75881 506 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 SLU7O95391 586 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 H6PDO95479 791 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 ATP6V1C1P21283 382 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 NTF4P34130 210 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 ATP12AP54707 1039 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 CASP9P55211 416 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 NAA20P61599 178 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 RPS26P62854 115 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 RASGEF1BQ0VAM2 473 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 PTGR1Q14914 329 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 MLC1Q15049 377 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 QPRTQ15274 297 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 MTERF4Q7Z6M4 381 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 PHC2Q8IXK0 858 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 ADAMTS15Q8TE58 950 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 TWIST2Q8WVJ9 160 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 OR5B2Q96R09 309 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 TRAF4Q9BUZ4 470 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 THUMPD3Q9BV44 507 aaKnown RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 MECRQ9BV79 373 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 ACTRT3Q9BYD9 372 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 DTNAQ9Y4J8 743 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 TRAF6Q9Y4K3 522 aa10.85□□□□□ -0.67
HDAC3-204ENST00000469207 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-204ENST00000469207 IGHV4-30-2A0A087WSY4 118 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 NPIPB9F8W1W9 429 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ABCD4O14678 606 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 CD5LO43866 347 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 FCMRO60667 390 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 TRIM13O60858 407 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 TP53P04637 393 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ELK4P28324 431 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 SLC7A1P30825 629 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 LCN1P31025 176 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ARRB2P32121 409 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 OR3A2P47893 321 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 CCR4P51679 360 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 RAC3P60763 192 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 IRX1P78414 480 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-204ENST00000469207 SPOCK1Q08629 439 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 P2RY6Q15077 328 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 PPA1Q15181 289 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 GPR68Q15743 365 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 TIGD2Q4W5G0 525 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ARL13AQ5H913 290 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-204ENST00000469207 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ZCCHC23Q6ZST2 131 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 Q6ZT83 130 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 R3HCC1LQ7Z5L2 792 aaKnown RBP10.84□□□□□ -0.67
HDAC3-204ENST00000469207 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 TMCO5AQ8N6Q1 288 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 UBLCP1Q8WVY7 318 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-204ENST00000469207 MTERF3Q96E29 417 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 MRGPRX4Q96LA9 322 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 SDF2Q99470 211 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 HOXD1Q9GZZ0 328 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 SERHL2Q9H4I8 314 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 BCO1Q9HAY6 547 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 NGBQ9NPG2 151 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 ACTL7BQ9Y614 415 aa10.84□□□□□ -0.67
HDAC3-204ENST00000469207 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
HDAC3-204ENST00000469207 GJE1A6NN92 205 aa10.83□□□□□ -0.68
HDAC3-204ENST00000469207 E7EQL1 145 aa10.83□□□□□ -0.68
HDAC3-204ENST00000469207 H3BNH8 94 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms