RNA–Protein interactions for RNA: ENST00000469003.5

CCDC28B-204, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 2

Gene CCDC28B, Length 1,235 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-204ENST00000469003 ETV2O00321 342 aaPredicted RBP14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 RNASET2O00584 256 aaKnown RBP14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 BIRC5O15392 142 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 CBFBQ13951 182 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 QPRTQ15274 297 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 CHI3L2Q15782 390 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ZNF141Q15928 474 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ARHGAP11BQ3KRB8 267 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 KRT71Q3SY84 523 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 PDZK1Q5T2W1 519 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 TFAP2EQ6VUC0 442 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ZNF704Q6ZNC4 412 aaPredicted RBP14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 PLEKHM3Q6ZWE6 761 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 WFDC8Q8IUA0 241 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 TUSC5Q8IXB3 177 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 STEAP2Q8NFT2 490 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 OR8J2Q8NGG1 315 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 RFWD2Q8NHY2 731 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ZNF524Q96C55 264 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 HDHD5Q9BXW7 423 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 LAT2Q9GZY6 243 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 SSU72Q9NP77 194 aaKnown RBP14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 RAP2CQ9Y3L5 183 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ARID1AO14497 2285 aa14.76□□□□□ -0.05
CCDC28B-204ENST00000469003 ESPNB1AK53 854 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 RGS16O15492 202 aaPredicted RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 DNAJA2O60884 412 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 STX11O75558 287 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 GCM2O75603 506 aaPredicted RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 PRKD3O94806 890 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 SNUPNO95149 360 aaKnown RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 MYZAPP0CAP1 466 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 CCR4P51679 360 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 RAC3P60763 192 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 LTBQ06643 244 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 ZNF844Q08AG5 666 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 SKP2Q13309 424 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 GPR68Q15743 365 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 CLEC9AQ6UXN8 241 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 NUFIP2Q7Z417 695 aaKnown RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 YTHDF3Q7Z739 585 aaKnown RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 GABRG1Q8N1C3 465 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 CLEC4FQ8N1N0 589 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 SLC43A2Q8N370 569 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 ATP6V1C2Q8NEY4 427 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 OR4A15Q8NGL6 344 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 MIPOL1Q8TD10 442 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 IGFBPL1Q8WX77 278 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 ARL8AQ96BM9 186 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 PERPQ96FX8 193 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 PLPPR2Q96GM1 343 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 COX4I2Q96KJ9 171 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 PPP1R36Q96LQ0 422 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 TACO1Q9BSH4 297 aaKnown RBP14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 TMEM204Q9BSN7 226 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 GSX2Q9BZM3 304 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 DPY30Q9C005 99 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 ZNF350Q9GZX5 532 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 KCNE5Q9UJ90 142 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 PCDHGB4Q9UN71 923 aa14.75□□□□□ -0.05
CCDC28B-204ENST00000469003 FAM171A2A8MVW0 826 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 TM9SF1O15321 606 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 FCMRO60667 390 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 SCN2BO60939 215 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 PLAUP00749 431 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 YES1P07947 543 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 DHRS4L1P0CG22 281 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 SLC7A1P30825 629 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 RPL14P50914 215 aaKnown RBP14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 ANXA8L1Q5VT79 327 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 HEPHL1Q6MZM0 1159 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 C3orf33Q6P1S2 294 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 C16orf62Q7Z3J2 963 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 KIRREL3Q8IZU9 778 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 ST8SIA1Q92185 356 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 S100PBPQ96BU1 408 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 Q96MF0 132 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 BDH2Q9BUT1 245 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 THUMPD3Q9BV44 507 aaKnown RBP14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 C20orf27Q9GZN8 174 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 OR51I1Q9H343 314 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 EXD2Q9NVH0 621 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 MKLN1Q9UL63 735 aa14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 V9GYY5 206 aaPredicted RBP14.74□□□□□ -0.05
CCDC28B-204ENST00000469003 CENPVL1A0A0U1RR11 272 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 PRSS51A0A1B0GVH4 220 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 A0A1W2PNR3 127 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 H7C1Q1 480 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 HS3ST1O14792 307 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 TMCC2O75069 709 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 UGT2B17O75795 530 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 AGR2O95994 175 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 CSTAP01040 98 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 HEXAP06865 529 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 GUSBP08236 651 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 PAX1P15863 534 aa14.73□□□□□ -0.05
CCDC28B-204ENST00000469003 ENPP1P22413 925 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms