RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 MRGPRX4Q96LA9 322 aa9.98□□□□□ -0.81
MSH5-212ENST00000467319 RNF145Q96MT1 663 aa9.98□□□□□ -0.81
MSH5-212ENST00000467319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.98□□□□□ -0.81
MSH5-212ENST00000467319 VDAC3Q9Y277 283 aa9.98□□□□□ -0.81
MSH5-212ENST00000467319 GPC6Q9Y625 555 aaPredicted RBP9.98□□□□□ -0.81
MSH5-212ENST00000467319 HEATR5AQ86XA9 2040 aa9.98□□□□□ -0.81
MSH5-212ENST00000467319 PHF3Q92576 2039 aaKnown RBP9.98□□□□□ -0.81
MSH5-212ENST00000467319 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 KDM4EB2RXH2 506 aaPredicted RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 C5orf58C9J3I9 102 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 FAM47E-STBD1D6RA91 191 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 GTPBP1O00178 669 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 ZG16O60844 167 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 GCM2O75603 506 aaPredicted RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 DCTN3O75935 186 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 PABPC4LP0CB38 370 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 POU3F2P20265 443 aaPredicted RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 ADH6P28332 368 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 PRKAR1BP31321 381 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 EIF1P41567 113 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 SLC6A8P48029 635 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CCR4P51679 360 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CRYBA2P53672 197 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CBFBQ13951 182 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 QPRTQ15274 297 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ZSWIM7Q19AV6 140 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CTU2Q2VPK5 515 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 GKAP1Q5VSY0 366 aaPredicted RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 ZNF585AQ6P3V2 769 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 DHRS4L2Q6PKH6 230 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ENPP6Q6UWR7 440 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 RPTNQ6XPR3 784 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 B3GNT6Q6ZMB0 384 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ARPINQ7Z6K5 226 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 COMTD1Q86VU5 262 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ZPLD1Q8TCW7 415 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ITLN2Q8WWU7 325 aaPredicted RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 SLC35B4Q969S0 331 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CMTM5Q96DZ9 223 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 REXO5Q96IC2 774 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 ADGRG7Q96K78 797 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 LRRC37BQ96QE4 947 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 TUBA1CQ9BQE3 449 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 THUMPD3Q9BV44 507 aaKnown RBP9.97□□□□□ -0.81
MSH5-212ENST00000467319 RLIMQ9NVW2 624 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 GID8Q9NWU2 228 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 CLCF1Q9UBD9 225 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ANGPT4Q9Y264 503 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 ZNF337Q9Y3M9 751 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 AP4B1Q9Y6B7 739 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 KIAA1549Q9HCM3 1950 aa9.97□□□□□ -0.81
MSH5-212ENST00000467319 PCNX1Q96RV3 2341 aa9.96□□□□□ -0.81
MSH5-212ENST00000467319 ARHGAP21Q5T5U3 1957 aa9.96□□□□□ -0.81
MSH5-212ENST00000467319 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 CD8B2A6NJW9 211 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 AHRRA9YTQ3 701 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 FAM220BPB1ANY3 271 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 H0Y3Z8 333 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 H0YC42 278 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 AP3D1O14617 1153 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 EPPINO95925 133 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 GLI4P10075 376 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 PEPDP12955 493 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 IL7RP16871 459 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 PGCP20142 388 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 IL11P20809 199 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 AGAP20933 346 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 STARP49675 285 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 NUDT2P50583 147 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 TPD52P55327 224 aaPredicted RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 CLDN20P56880 219 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 NUP107P57740 925 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 EPS8Q12929 822 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 LARS2Q15031 903 aaKnown RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 NSUN5P2Q63ZY6 315 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 KRT73Q86Y46 540 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 LACC1Q8IV20 430 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 SLC30A8Q8IWU4 369 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 ZNF440Q8IYI8 595 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 OR10A6Q8NH74 314 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
MSH5-212ENST00000467319 TTYH2Q9BSA4 534 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 ACER3Q9NUN7 267 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 CMTM6Q9NX76 183 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 ABCD2Q9UBJ2 740 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 CAMK2AQ9UQM7 478 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 IFT52Q9Y366 437 aa9.96□□□□□ -0.82
MSH5-212ENST00000467319 MYO7BQ6PIF6 2116 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 CFAP73A6NFT4 308 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 H3BML4 177 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 NME4O00746 187 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 AIM2O14862 343 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 ADAMDEC1O15204 470 aa9.95□□□□□ -0.82
MSH5-212ENST00000467319 EFNA2O43921 213 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms