RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 NPAS1Q99742 590 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 SPATA9Q9BWV2 254 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 TMEM185BQ9H7F4 350 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 DNAJB12Q9NXW2 375 aaKnown RBP12.56□□□□□ -0.4
UBA3-209ENST00000466763 STOML1Q9UBI4 398 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 USP22Q9UPT9 525 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 MEMO1Q9Y316 297 aa12.56□□□□□ -0.4
UBA3-209ENST00000466763 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
UBA3-209ENST00000466763 SPENQ96T58 3664 aaKnown RBP12.56□□□□□ -0.4
UBA3-209ENST00000466763 M0QX08 132 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 WDR1O75083 606 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 OPN1SWP03999 348 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 THBS1P07996 1170 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 GP1BBP13224 206 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 GABRA1P14867 456 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 PRKCAP17252 672 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 ME2P23368 584 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 PCGF2P35227 344 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 EIF1P41567 113 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 SLC6A8P48029 635 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 LHX2P50458 406 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 SLC7A2P52569 658 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 EEF1A1P68104 462 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 INTS11Q5TA45 600 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 TMEM211Q6ICI0 200 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 PPP4R4Q6NUP7 873 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 HACD2Q6Y1H2 254 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 B3GNT6Q6ZMB0 384 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 NET1Q7Z628 596 aaPredicted RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 ARMC8Q8IUR7 673 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 SLC15A3Q8IY34 581 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 ZNF440Q8IYI8 595 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 ULK2Q8IYT8 1036 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 RPRMLQ8N4K4 120 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 FITM2Q8N6M3 262 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 SMYD1Q8NB12 490 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 OR2T12Q8NG77 320 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 OR10Q1Q8NGQ4 319 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 POC1BQ8TC44 478 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 TMEM234Q8WY98 164 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 TRIB1Q96RU8 372 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 GPATCH1Q9BRR8 931 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
UBA3-209ENST00000466763 CMTM6Q9NX76 183 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 ADA2Q9NZK5 511 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 AP3M1Q9Y2T2 418 aa12.55□□□□□ -0.4
UBA3-209ENST00000466763 HELZ2Q9BYK8 2649 aaKnown RBP12.54□□□□□ -0.4
UBA3-209ENST00000466763 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 CDHR4A6H8M9 788 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 PRORSD1PA6NEY8 169 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 CFAP73A6NFT4 308 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 AHRRA9YTQ3 701 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 E9PLN8 166 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 LINC01387J3KSC0 135 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 AP3D1O14617 1153 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 GSTA4O15217 222 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 FRS3O43559 492 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 ZG16O60844 167 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 UQCRBP14927 111 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 CPN1P15169 458 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 ZNF17P17021 662 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 GZMMP51124 257 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 SESN3P58005 492 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 LIPEQ05469 1076 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 SRSF1Q07955 248 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBA3-209ENST00000466763 PMPCAQ10713 525 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 MERTKQ12866 999 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBA3-209ENST00000466763 ZSWIM7Q19AV6 140 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 ERICH5Q6P6B1 374 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 RPTNQ6XPR3 784 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 ZNF550Q7Z398 422 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
UBA3-209ENST00000466763 CALHM3Q86XJ0 350 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 CADM2Q8N3J6 435 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 FAM71CQ8NEG0 241 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
UBA3-209ENST00000466763 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 REXO5Q96IC2 774 aaKnown RBP12.54□□□□□ -0.4
UBA3-209ENST00000466763 NSL1Q96IY1 281 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 VKORC1Q9BQB6 163 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 PRDM14Q9GZV8 571 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 KLHL28Q9NXS3 571 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 AP4B1Q9Y6B7 739 aa12.54□□□□□ -0.4
UBA3-209ENST00000466763 ELOVL7A1L3X0 281 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 FAM220BPB1ANY3 271 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 H0YC42 278 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 TPST1O60507 370 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
UBA3-209ENST00000466763 ZNF708P17019 499 aa12.53□□□□□ -0.4
UBA3-209ENST00000466763 CCNA2P20248 432 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms