RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 C10orf111Q8N326 155 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 TMCO5AQ8N6Q1 288 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 ECSITQ9BQ95 431 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 QRSL1Q9H0R6 528 aaKnown RBP15.38■□□□□ 0.05
VPS52-215ENST00000464425 MTHFD2LQ9H903 347 aaPredicted RBP15.38■□□□□ 0.05
VPS52-215ENST00000464425 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
VPS52-215ENST00000464425 NKX2-6A6NCS4 301 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CD8B2A6NJW9 211 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CLCA1A8K7I4 914 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CYSRT1A8MQ03 144 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 C19orf84I3L1E1 186 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 ZNF264O43296 627 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 SEC14L5O43304 696 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 OPN1LWP04000 364 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CHRM4P08173 479 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 NUDT7P0C024 238 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 UBL4AP11441 157 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CPA2P48052 419 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 P2RX1P51575 399 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CCR4P51679 360 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CRISP3P54108 245 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 RBBP4Q09028 425 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 BCL2A1Q16548 175 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 PLPPR5Q32ZL2 321 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CALHM3Q86XJ0 350 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 LIX1LQ8IVB5 337 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 SLC15A3Q8IY34 581 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 NAXEQ8NCW5 288 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 OR10A6Q8NH74 314 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 ARSGQ96EG1 525 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 RNF145Q96MT1 663 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 CALHM2Q9HA72 323 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 BCL2L10Q9HD36 194 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 ICAM5Q9UMF0 924 aa15.37■□□□□ 0.05
VPS52-215ENST00000464425 A0A0G2JPF8 293 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 HSPB2A8KAH6 182 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 HNRNPCL2B2RXH8 293 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 HNRNPCL3B7ZW38 293 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 LINC01387J3KSC0 135 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 HNRNPCL1O60812 293 aaKnown RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 CSTAP01040 98 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 IL2RAP01589 272 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 LINGO3P0C6S8 592 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 UBTFL6P0CB48 400 aaPredicted RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 HNRNPCL4P0DMR1 293 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 ARAFP10398 606 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 TIMP3P35625 211 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CLDN15P56746 228 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CLDN20P56880 219 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 PSME3P61289 254 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 TOMM34Q15785 309 aaPredicted RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 HSPB2Q16082 182 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CYP51A1Q16850 503 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 REEP3Q6NUK4 255 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 C6orf89Q6UWU4 347 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 EIF3MQ7L2H7 374 aaKnown RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 CHMP1BQ7LBR1 199 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 PTOV1Q86YD1 416 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 SLC30A8Q8IWU4 369 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 GTPBP8Q8N3Z3 284 aaPredicted RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 MEIOBQ8N635 442 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 C9orf106Q8NAJ2 232 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 POC1BQ8TC44 478 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 GPR119Q8TDV5 335 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 MAL2Q969L2 176 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 ZBTB8AQ96BR9 441 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 ZNF583Q96ND8 569 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 TREX2Q9BQ50 279 aaPredicted RBP15.36■□□□□ 0.05
VPS52-215ENST00000464425 LAT2Q9GZY6 243 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 C1orf21Q9H246 121 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 SLC38A1Q9H2H9 487 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 RUBCNLQ9H714 662 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CHST11Q9NPF2 352 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 KCNJ16Q9NPI9 418 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CMTM6Q9NX76 183 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 AP4B1Q9Y6B7 739 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 KIAA1549Q9HCM3 1950 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 DSPPQ9NZW4 1301 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CACNA1CQ13936 2221 aa15.36■□□□□ 0.05
VPS52-215ENST00000464425 CLDN24A6NM45 220 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 B2RBV5 119 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 EIF4E2O60573 245 aaKnown RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 BCAS1O75363 584 aaPredicted RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 UBOX5O94941 541 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 BCHEP06276 602 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 ZNF17P17021 662 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 CEACAM8P31997 349 aaPredicted RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 AGFG1P52594 562 aaKnown RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 SUMO3P55854 103 aaPredicted RBP15.35■□□□□ 0.05
VPS52-215ENST00000464425 CDK6Q00534 326 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 SKP2Q13309 424 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 FGFBP1Q14512 234 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 C16orf89Q6UX73 402 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 PGAM4Q8N0Y7 254 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 C11orf65Q8NCR3 313 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 OR5W2Q8NH69 310 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 ZNF524Q96C55 264 aa15.35■□□□□ 0.05
VPS52-215ENST00000464425 TMEM19Q96HH6 336 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms