RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 FBXO27Q8NI29 283 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 TRIB1Q96RU8 372 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ELAC2Q9BQ52 826 aaKnown RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 EXOSC3Q9NQT5 275 aaKnown RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.93■□□□□ 0.14
VPS52-214ENST00000463486 MRGBPQ9NV56 204 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 ARMCX1Q9P291 453 aa15.93■□□□□ 0.14
VPS52-214ENST00000463486 DOCK7Q96N67 2140 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 GMNCA6NCL1 334 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 C19orf84I3L1E1 186 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 ADAMDEC1O15204 470 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 SLC22A2O15244 555 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 SNX3O60493 162 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 PGM3O95394 542 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 TGM6O95932 706 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 DBIP07108 87 aaKnown RBP15.92■□□□□ 0.14
VPS52-214ENST00000463486 NID1P14543 1247 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 SHC1P29353 583 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 EIF1P41567 113 aaKnown RBP15.92■□□□□ 0.14
VPS52-214ENST00000463486 GZMMP51124 257 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 CRISP3P54108 245 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 EEF1A1P68104 462 aaKnown RBP15.92■□□□□ 0.14
VPS52-214ENST00000463486 QPRTQ15274 297 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 SF3B4Q15427 424 aaKnown RBP eCLIP15.92■□□□□ 0.142e-6■■■■■ 29.7
VPS52-214ENST00000463486 SPATA21Q7Z572 469 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 VRK2Q86Y07 508 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 PTOV1Q86YD1 416 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 CMIPQ8IY22 773 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 UBQLNLQ8IYU4 475 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 METTL25Q8N6Q8 603 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 ASB5Q8WWX0 329 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 CCDC106Q9BWC9 280 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 UCK2Q9BZX2 261 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 TMEM38AQ9H6F2 299 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 RLIMQ9NVW2 624 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 COQ3Q9NZJ6 369 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 CALML5Q9NZT1 146 aa15.92■□□□□ 0.14
VPS52-214ENST00000463486 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.92■□□□□ 0.14
VPS52-214ENST00000463486 GPC6Q9Y625 555 aaPredicted RBP15.92■□□□□ 0.14
VPS52-214ENST00000463486 LOC100653049A0A140TA62 436 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 CDHR4A6H8M9 788 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 KRT34O76011 436 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 OPN1LWP04000 364 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 HTR1EP28566 365 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 ZNF136P52737 540 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 MTPNP58546 118 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 CBFBQ13951 182 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 CAPRIN1Q14444 709 aaKnown RBP15.91■□□□□ 0.14
VPS52-214ENST00000463486 GCNT6Q5T4J0 391 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 ZNF836Q6ZNA1 936 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 SNX32Q86XE0 403 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 TREML1Q86YW5 311 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 CLIP4Q8N3C7 705 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 OR10Q1Q8NGQ4 319 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 OR52P1PQ8NH57 321 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 WDR60Q8WVS4 1066 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 WNT2BQ93097 391 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 ZNF845Q96IR2 970 aaPredicted RBP15.91■□□□□ 0.14
VPS52-214ENST00000463486 MRGPRX4Q96LA9 322 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 MYLK2Q9H1R3 596 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 KAT8Q9H7Z6 458 aaKnown RBP15.91■□□□□ 0.14
VPS52-214ENST00000463486 MED12LQ86YW9 2145 aa15.91■□□□□ 0.14
VPS52-214ENST00000463486 INTS1Q8N201 2190 aaKnown RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 MAST4O15021 2626 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 A0A0J9YW62 118 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 CYSRT1A8MQ03 144 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 FAM47E-STBD1D6RA91 191 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 AP3D1O14617 1153 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 GCM2O75603 506 aaPredicted RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 CYP7B1O75881 506 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 RCBTB2O95199 551 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 NUDT14O95848 222 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 THBS1P07996 1170 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 IL7RP16871 459 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 ELK4P28324 431 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 SESN3P58005 492 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 CDK6Q00534 326 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 FOXF2Q12947 444 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 NFYCQ13952 458 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 GNA13Q14344 377 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 TRMT5Q32P41 509 aaKnown RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 MRPL2Q5T653 305 aaKnown RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 NANOGP8Q6NSW7 305 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 NET1Q7Z628 596 aaPredicted RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 PIGWQ7Z7B1 504 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 MTDHQ86UE4 582 aaKnown RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 LSRQ86X29 649 aaPredicted RBP15.9■□□□□ 0.14
VPS52-214ENST00000463486 GRAMD2AQ8IUY3 354 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 PEX5LQ8IYB4 626 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 LILRA2Q8N149 483 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 MEIOBQ8N635 442 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 TMCO5AQ8N6Q1 288 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 NFKBIDQ8NI38 313 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 CA5BP1Q8WTZ4 195 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 ST8SIA1Q92185 356 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 FIG4Q92562 907 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 SLC39A3Q9BRY0 314 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 NANOGQ9H9S0 305 aa15.9■□□□□ 0.14
VPS52-214ENST00000463486 ACER3Q9NUN7 267 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms