RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PAMR1Q6UXH9 720 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 DNM1P46Q6ZS02 220 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 CYS1Q717R9 158 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SKA3Q8IX90 412 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 GPR65Q8IYL9 337 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF679Q8IYX0 411 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 ZCCHC7Q8N3Z6 543 aaKnown RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 BHLHE23Q8NDY6 225 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 KLHL30-AS1Q8NEE0 82 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR2T33Q8NG76 320 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR4D5Q8NGN0 318 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR13C2Q8NGS9 318 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR9A1PQ8NGU1 263 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR2T3Q8NH03 318 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 OR1F12Q8NHA8 337 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 FAF2Q96CS3 445 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 AMDHD1Q96NU7 426 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 RPRD1AQ96P16 312 aaPredicted RBP2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SMIM14Q96QK8 99 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 CAB39LQ9H9S4 337 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 ABCD2Q9UBJ2 740 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 CHRNA9Q9UGM1 479 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 COPS3Q9UNS2 423 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 SCML2Q9UQR0 700 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 KDRP35968 1356 aa2.31□□□□□ -2.04
HDAC6-212ENST00000461608 IGLV8-61A0A075B6I0 122 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 TRAV26-1A0A087WT03 109 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 LOC100131303A0A0U1RQF7 123 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 A0A0U1RQS6 177 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 K7ENP7 123 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 WWP2O00308 870 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PRKYO43930 277 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 CRLF1O75462 422 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 ECI2O75521 394 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 SERF1AO75920 110 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 NOL4O94818 638 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 IGHG4P01861 327 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 THY1P04216 161 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 SLC35E2P0CK97 266 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 RNH1P13489 461 aaKnown RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 POU2F1P14859 743 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 CYP2B6P20813 491 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GATA2P23769 480 aaPredicted RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GDF1P27539 372 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GCKP35557 465 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 RPL13AP40429 203 aaKnown RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 MDH2P40926 338 aaKnown RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 EPS15P42566 896 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 SLC26A2P50443 739 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 CSRP3P50461 194 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 P2RY4P51582 365 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PRKXP51817 358 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 EFNB2P52799 333 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 ERVPABLB-1P60509 514 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 LMO4P61968 165 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 TNFRSF17Q02223 184 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 MXD4Q14582 209 aaPredicted RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 SLC15A2Q16348 729 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GSG1Q2KHT4 349 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 TIGITQ495A1 244 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 C10orf120Q5SQS8 335 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 FAM120AOSQ5T036 256 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF658Q5TYW1 1059 aaPredicted RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 CGB2Q6NT52 195 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 Q6ZR54 194 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 RUFY3Q7L099 469 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GDPD3Q7L5L3 318 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 MOB1BQ7L9L4 216 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PPP1R27Q86WC6 154 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 TGIF2LXQ8IUE1 241 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 UBQLNLQ8IYU4 475 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 OR5L2Q8NGL0 311 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 OR13F1Q8NGS4 319 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 GTSF1Q8WW33 167 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 MAIP1Q8WWC4 291 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 HTR3CQ8WXA8 447 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PIGCQ92535 297 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 EFHD2Q96C19 240 aaPredicted RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 RANBP9Q96S59 729 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 TSSK1BQ9BXA7 367 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PARD6BQ9BYG5 372 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 RAB34Q9BZG1 259 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 VCX2Q9H322 139 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 ISG20L2Q9H9L3 353 aaKnown RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 OR1A1Q9P1Q5 309 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 CDH9Q9ULB4 789 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 PLLPQ9Y342 182 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 AK6Q9Y3D8 172 aaKnown RBP2.3□□□□□ -2.04
HDAC6-212ENST00000461608 USP16Q9Y5T5 823 aa2.3□□□□□ -2.04
HDAC6-212ENST00000461608 COL2A1P02458 1487 aaPredicted RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 PNPLA6Q8IY17 1366 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 IGKV3D-20A0A0C4DH25 116 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 METTL21EPA6NDL7 271 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 SRRM5B3KS81 715 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 H3BMQ9 156 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 GOLGA8SH3BPF8 625 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 POLR2DO15514 142 aaKnown RBP2.29□□□□□ -2.04
HDAC6-212ENST00000461608 ZNF208O43345 1280 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 CXCL13O43927 109 aa2.29□□□□□ -2.04
HDAC6-212ENST00000461608 HCN1O60741 890 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms