RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SYNGR4O95473 234 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 C1QCP02747 245 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 NID1P14543 1247 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 GPX2P18283 190 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 SUCLG1P53597 346 aaKnown RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 CLDN20P56880 219 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 NFYCQ13952 458 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 CDSNQ15517 529 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 NDUFAF6Q330K2 333 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 LIN52Q52LA3 116 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 GCNT6Q5T4J0 391 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 GTF2IRD2BQ6EKJ0 949 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 GTF2IRD2Q86UP8 949 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 C9orf106Q8NAJ2 232 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 FAM71CQ8NEG0 241 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 BBS10Q8TAM1 723 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 ZNF317Q96PQ6 595 aaPredicted RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 SH3GL1Q99961 368 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 TREX2Q9BQ50 279 aaPredicted RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 SFXN3Q9BWM7 321 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 PINK1Q9BXM7 581 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 UCK2Q9BZX2 261 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 BCL2L10Q9HD36 194 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 SLC25A37Q9NYZ2 338 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 VAPAQ9P0L0 249 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 SLAMF8Q9P0V8 285 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 CLCF1Q9UBD9 225 aa14.55□□□□□ -0.08
CD28-203ENST00000458610 FOXD3Q9UJU5 478 aaPredicted RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 MCTS1Q9ULC4 181 aaKnown RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 SPIN1Q9Y657 262 aaPredicted RBP14.55□□□□□ -0.08
CD28-203ENST00000458610 PCNX1Q96RV3 2341 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 NKX2-6A6NCS4 301 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 SHISA8B8ZZ34 492 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 ETV2O00321 342 aaPredicted RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 ADAMDEC1O15204 470 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 NPPAP01160 153 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 THBS1P07996 1170 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 PABPC4LP0CB38 370 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 HOXB9P17482 250 aaPredicted RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 BMP5P22003 454 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 GRNP28799 593 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 HTR3AP46098 478 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 EIF1AXP47813 144 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 CARD18P57730 90 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 FOXF1Q12946 379 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 SELENBP1Q13228 472 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 CYLC2Q14093 348 aaPredicted RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 MMEL1Q495T6 779 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 RUNDC3AQ59EK9 446 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 COQ5Q5HYK3 327 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 DLEU7Q6UYE1 221 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 DHDDSQ86SQ9 333 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 KRT73Q86Y46 540 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 LIX1LQ8IVB5 337 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 OR2V1Q8NHB1 315 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 POC1BQ8TC44 478 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 INTS12Q96CB8 462 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 TMEM19Q96HH6 336 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 REXO5Q96IC2 774 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 KLHL15Q96M94 604 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 SPATA5L1Q9BVQ7 753 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 NSRP1Q9H0G5 558 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 QRSL1Q9H0R6 528 aaKnown RBP14.54□□□□□ -0.08
CD28-203ENST00000458610 PIGMQ9H3S5 423 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 SAR1AQ9NR31 198 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 ACER3Q9NUN7 267 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 HECTD1Q9ULT8 2610 aa14.54□□□□□ -0.08
CD28-203ENST00000458610 DSPPQ9NZW4 1301 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 TRBV5-3A0A0A0MS03 114 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 CENPVL1A0A0U1RR11 272 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 BBIP1A8MTZ0 92 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 NTN1O95631 604 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 ETS2P15036 469 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 RPS4Y1P22090 263 aaKnown RBP14.53□□□□□ -0.08
CD28-203ENST00000458610 SLC6A2P23975 617 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 RYKP34925 604 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 APOBEC1P41238 236 aaKnown RBP14.53□□□□□ -0.08
CD28-203ENST00000458610 ASCL1P50553 236 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 ZNF136P52737 540 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 SESN3P58005 492 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 PON3Q15166 354 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 TOMM34Q15785 309 aaPredicted RBP14.53□□□□□ -0.08
CD28-203ENST00000458610 HBMQ6B0K9 141 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 CGB2Q6NT52 195 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 REEP3Q6NUK4 255 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 ZNF550Q7Z398 422 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 GGNQ86UU5 652 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 MSRB3Q8IXL7 192 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 PCYOX1LQ8NBM8 494 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 NAXEQ8NCW5 288 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 OR10D3Q8NH80 312 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 OSTF1Q92882 214 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 ANKRD27Q96NW4 1050 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 CGREF1Q99674 301 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 ENKD1Q9H0I2 346 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 TMEM38AQ9H6F2 299 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 GLRX2Q9NS18 164 aa14.53□□□□□ -0.08
CD28-203ENST00000458610 CFAP73A6NFT4 308 aa14.52□□□□□ -0.09
CD28-203ENST00000458610 KDM4EB2RXH2 506 aaPredicted RBP14.52□□□□□ -0.09
CD28-203ENST00000458610 SYT5O00445 386 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms