RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NSUN5P2Q63ZY6 315 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 SEM1Q6ZVN7 128 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 LACC1Q8IV20 430 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 PEX5LQ8IYB4 626 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 TMCO5AQ8N6Q1 288 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 METTL25Q8N6Q8 603 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 ACBD4Q8NC06 268 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 WDR60Q8WVS4 1066 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 UCN2Q96RP3 112 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 TUBA1CQ9BQE3 449 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 THUMPD3Q9BV44 507 aaKnown RBP17.99■□□□□ 0.47
COL9A3-202ENST00000452372 FAM107BQ9H098 131 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 ARMCX1Q9P291 453 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 STOML1Q9UBI4 398 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 RNF6Q9Y252 685 aa17.99■□□□□ 0.47
COL9A3-202ENST00000452372 GPC6Q9Y625 555 aaPredicted RBP17.99■□□□□ 0.47
COL9A3-202ENST00000452372 CLDN24A6NM45 220 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 KDM4EB2RXH2 506 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 H3BML4 177 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 BCAS1O75363 584 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 CYP7B1O75881 506 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 NPPAP01160 153 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 ARAFP10398 606 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 TIMP3P35625 211 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 CCR4P51679 360 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 CLDN15P56746 228 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 EEFSECP57772 596 aaKnown RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 CYLC2Q14093 348 aaPredicted RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 TRMT5Q32P41 509 aaKnown RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 MMEL1Q495T6 779 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 GCNT6Q5T4J0 391 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 RIPPLY2Q5TAB7 128 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 ADGRE4PQ86SQ3 457 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 SNX32Q86XE0 403 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 MEIOBQ8N635 442 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 OR10Q1Q8NGQ4 319 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 OR52P1PQ8NH57 321 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 ASB5Q8WWX0 329 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 SDCCAG3Q96C92 435 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 RNF145Q96MT1 663 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 TRIB1Q96RU8 372 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 TMEM38AQ9H6F2 299 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 EXOSC3Q9NQT5 275 aaKnown RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 FAM53CQ9NYF3 392 aa17.98■□□□□ 0.47
COL9A3-202ENST00000452372 INTS1Q8N201 2190 aaKnown RBP17.98■□□□□ 0.47
COL9A3-202ENST00000452372 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 A0A0G2JNJ9 132 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 C5orf58C9J3I9 102 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 ETV2O00321 342 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 TOXO94900 526 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 PGM3O95394 542 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 NID1P14543 1247 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 COX6B1P14854 86 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 PRKCAP17252 672 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 SUCLG1P53597 346 aaKnown RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 CLDN20P56880 219 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 RAC1P63000 192 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 PLAURQ03405 335 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 QPRTQ15274 297 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 ADRM1Q16186 407 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 SLC25A53Q5H9E4 307 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 RPS26P11Q5JNZ5 115 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 MTDHQ86UE4 582 aaKnown RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 UBQLNLQ8IYU4 475 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 FBXO27Q8NI29 283 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 RP9Q8TA86 221 aaKnown RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 CNOT9Q92600 299 aaKnown RBP17.97■□□□□ 0.47
COL9A3-202ENST00000452372 ZNF524Q96C55 264 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 LRRC58Q96CX6 371 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 MRGPRX4Q96LA9 322 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 CCDC106Q9BWC9 280 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 Q9UFV3 132 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 ZNF232Q9UNY5 417 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 F8P00451 2351 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 KIAA1549Q9HCM3 1950 aa17.97■□□□□ 0.47
COL9A3-202ENST00000452372 DOCK7Q96N67 2140 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CELSR1Q9NYQ6 3014 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 SPG11Q96JI7 2443 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MBD3L4A6NDZ8 208 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MBD3L3A6NE82 208 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MBD3L5A6NJ08 208 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CLCA1A8K7I4 914 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MRASO14807 208 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 NTN1O95631 604 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 THBS1P07996 1170 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 ETS2P15036 469 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 PGCP20142 388 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CHRNB4P30926 498 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CEACAM8P31997 349 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MTPNP58546 118 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CDK6Q00534 326 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 FOXF1Q12946 379 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 SELPLGQ14242 412 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 CAPRIN1Q14444 709 aaKnown RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 ZSWIM7Q19AV6 140 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 MRPL2Q5T653 305 aaKnown RBP17.96■□□□□ 0.47
COL9A3-202ENST00000452372 REP15Q6BDI9 236 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 NANOGP8Q6NSW7 305 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 REEP3Q6NUK4 255 aa17.96■□□□□ 0.47
COL9A3-202ENST00000452372 PIGWQ7Z7B1 504 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms