RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PINK1Q9BXM7 581 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 OR2B2Q9GZK3 357 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 LAT2Q9GZY6 243 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 SLC6A15Q9H2J7 730 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 AGPAT4Q9NRZ5 378 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 QPCTLQ9NXS2 382 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 KLHL28Q9NXS3 571 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 DNAJB12Q9NXW2 375 aaKnown RBP11.84□□□□□ -0.51
VPS33A-202ENST00000451053 DKKL1Q9UK85 242 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 SLC35A3Q9Y2D2 325 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
VPS33A-202ENST00000451053 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 CDHR4A6H8M9 788 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SYT5O00445 386 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 HNRNPRO43390 633 aaKnown RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 TPST1O60507 370 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 ADAM11O75078 769 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 TRAPPC6AO75865 159 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 KRT36O76013 467 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 EPPINO95925 133 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 HPNP05981 417 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 ENDOUP21128 410 aaKnown RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 DPP4P27487 766 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 MSX1P28360 303 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SRD5A2P31213 254 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 P2RX1P51575 399 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 CCR4P51679 360 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 HSF1Q00613 529 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 TLE1Q04724 770 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SLC10A1Q14973 349 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 RCN1Q15293 331 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 GLIPR1L2Q4G1C9 344 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 RNF220Q5VTB9 566 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 DHRS4L2Q6PKH6 230 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 ENPP6Q6UWR7 440 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 YRDCQ86U90 279 aaKnown RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SMYD1Q8NB12 490 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 PAPD5Q8NDF8 572 aaKnown RBP11.83□□□□□ -0.52
VPS33A-202ENST00000451053 CANT1Q8WVQ1 401 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 ZNF524Q96C55 264 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 HSH2DQ96JZ2 352 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 GPR137Q96N19 417 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 PTGES2Q9H7Z7 377 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 V9GYQ6 96 aa11.83□□□□□ -0.52
VPS33A-202ENST00000451053 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 ZNHIT1O43257 154 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 ZIC3O60481 467 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 ATP6V1G2O95670 118 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 NUDT14O95848 222 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 IGHG3P01860 377 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 FESP07332 822 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 ITGA2P17301 1181 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 HK1P19367 917 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 CD247P20963 164 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 KCNJ5P48544 419 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 SUMO3P55854 103 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 DSCR4P56555 118 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 FOXK1P85037 733 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 KCNC4Q03721 635 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 TOMM34Q15785 309 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 GPR32P1Q8NGA4 272 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 OR5W2Q8NH69 310 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 OR14L1PQ8NHC6 308 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 GPR119Q8TDV5 335 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 NPAS1Q99742 590 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 ACKR4Q9NPB9 350 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 EXOSC3Q9NQT5 275 aaKnown RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 STX18Q9P2W9 335 aaKnown RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 VDAC3Q9Y277 283 aa11.82□□□□□ -0.52
VPS33A-202ENST00000451053 RPH3AQ9Y2J0 694 aaPredicted RBP11.82□□□□□ -0.52
VPS33A-202ENST00000451053 BOD1L1Q8NFC6 3051 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 PCNX3Q9H6A9 2034 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 TMEM229AB2RXF0 380 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 SHISA8B8ZZ34 492 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 H0Y3Z8 333 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 AP3D1O14617 1153 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 FRS3O43559 492 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 WISP1O95388 367 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 IFNW1P05000 195 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 FABP3P05413 133 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 LINGO3P0C6S8 592 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 PRG2P13727 222 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 RYKP34925 604 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 ZNF41P51814 821 aaPredicted RBP11.81□□□□□ -0.52
VPS33A-202ENST00000451053 CBFBQ13951 182 aa11.81□□□□□ -0.52
VPS33A-202ENST00000451053 GANABQ14697 944 aaKnown RBP11.81□□□□□ -0.52
VPS33A-202ENST00000451053 DUSP7Q16829 419 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms