RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 WDR60Q8WVS4 1066 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 CNOT9Q92600 299 aaKnown RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TMEM19Q96HH6 336 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 UCN2Q96RP3 112 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TRIM8Q9BZR9 551 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TMEM45AQ9NWC5 275 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-204ENST00000446876 SLC35A3Q9Y2D2 325 aa13.34□□□□□ -0.27
HDAC4-204ENST00000446876 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 AGAP5A6NIR3 686 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 EEF1E1-BLOC1S5C9J1V9 151 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 DVL2O14641 736 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 EEF1E1O43324 174 aaKnown RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 RCBTB2O95199 551 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 NTN1O95631 604 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 RYKP34925 604 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 EIF1P41567 113 aaKnown RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 SLC6A8P48029 635 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 EEFSECP57772 596 aaKnown RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 RAC1P63000 192 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 KCNJ10P78508 379 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 SGCBQ16585 318 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 AP1ARQ63HQ0 302 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 DLEU7Q6UYE1 221 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 VRK2Q86Y07 508 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 OR10D3Q8NH80 312 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 ADGRG7Q96K78 797 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 DNAJB12Q9NXW2 375 aaKnown RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 LEF1Q9UJU2 399 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 GPC6Q9Y625 555 aaPredicted RBP13.33□□□□□ -0.28
HDAC4-204ENST00000446876 DSPPQ9NZW4 1301 aa13.33□□□□□ -0.28
HDAC4-204ENST00000446876 AP3D1O14617 1153 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ANGPT2O15123 496 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 CXCL13O43927 109 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 DNAJA2O60884 412 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 AQP8O94778 261 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 IGFBP2P18065 325 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ME2P23368 584 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ELK4P28324 431 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 MAGEA8P43361 318 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 CRISP3P54108 245 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 DLX5P56178 289 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 SESN3P58005 492 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 RPS3AP61247 264 aaKnown RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 SIRPAP78324 504 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 MRPL2Q5T653 305 aaKnown RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 METTL21CQ5VZV1 264 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF836Q6ZNA1 936 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 MCEMP1Q8IX19 187 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 LILRA2Q8N149 483 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ACBD4Q8NC06 268 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 OR2V1Q8NHB1 315 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 OIT3Q8WWZ8 545 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 MRGPRX4Q96LA9 322 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 KLHL15Q96M94 604 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF317Q96PQ6 595 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ENKD1Q9H0I2 346 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 MTHFD2LQ9H903 347 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 RLIMQ9NVW2 624 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-204ENST00000446876 NDUFAF1Q9Y375 327 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 CELSR2Q9HCU4 2923 aa13.32□□□□□ -0.28
HDAC4-204ENST00000446876 A0A1W2PNV4 684 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
HDAC4-204ENST00000446876 BMP2P12643 396 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 NID1P14543 1247 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 IL7RP16871 459 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 PGCP20142 388 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ADH6P28332 368 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 UQCRC1P31930 480 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 OPRM1P35372 400 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ASCL1P50553 236 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 FADDQ13158 208 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SELPLGQ14242 412 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 TMEM176BQ3YBM2 270 aaPredicted RBP13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SLC25A53Q5H9E4 307 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 HBMQ6B0K9 141 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ESPNLQ6ZVH7 1005 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 PEX5LQ8IYB4 626 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 CNEP1R1Q8N9A8 125 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 OR52P1PQ8NH57 321 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 C10orf82Q8WW14 230 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SPOCK3Q9BQ16 436 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SFXN3Q9BWM7 321 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SRXN1Q9BYN0 137 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 COQ10BQ9H8M1 238 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 A4GALTQ9NPC4 353 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 CALML5Q9NZT1 146 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 KLHL14Q9P2G3 628 aa13.31□□□□□ -0.28
HDAC4-204ENST00000446876 STOML1Q9UBI4 398 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms