RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 MST1P26927 711 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 DPP4P27487 766 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SHC1P29353 583 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 PRKAR1BP31321 381 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SFTPDP35247 375 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 ACAA2P42765 397 aaKnown RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 MLLT10P55197 1068 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 CDH12P55289 794 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 TAS2R41P59536 307 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 RPP38P78345 283 aaKnown RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SRYQ05066 204 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 MERTKQ12866 999 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 TRAP1Q12931 704 aaKnown RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMED1Q13445 227 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 NRF1Q16656 503 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 GXYLT1Q4G148 440 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 FGD3Q5JSP0 725 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 RAET1LQ5VY80 246 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 TBPL2Q6SJ96 375 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 PLCZ1Q86YW0 608 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 UBQLNLQ8IYU4 475 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 HS3ST5Q8IZT8 346 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMEM251Q8N6I4 163 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 GPR119Q8TDV5 335 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 LZICQ8WZA0 190 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SCMH1Q96GD3 660 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 PKP2Q99959 881 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 FAM173AQ9BQD7 235 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 CHID1Q9BWS9 393 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR11A1Q9GZK7 315 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 POLE3Q9NRF9 147 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 MED17Q9NVC6 651 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 KLHL28Q9NXS3 571 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 CNIH4Q9P003 139 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 RPS6KB2Q9UBS0 482 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC7A7Q9UM01 511 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 NPIPA1Q9UND3 350 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 SAMD4AQ9UPU9 718 aaKnown RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 C15orf41Q9Y2V0 281 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 KLF13Q9Y2Y9 288 aaPredicted RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 PCDHGA9Q9Y5G4 932 aaKnown RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 MAGED1Q9Y5V3 778 aaPredicted RBP6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 CPAMD8Q8IZJ3 1885 aa6.86□□□□□ -1.31
SF3A3P1-201ENST00000446317 URB1O60287 2271 aaKnown RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TRAV17A0A0B4J275 112 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 A0A1B0GWA3 101 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TCRBV3S1A0A5B6 114 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 LRRN3E7EW58 273 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 H3BNX3 289 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FFAR1O14842 300 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TFECO14948 347 aaPredicted RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 RASAL1O95294 804 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 IFNW1P05000 195 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FABP3P05413 133 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 C8BP07358 591 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 GP1BBP13224 206 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 KLK2P20151 261 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 PSMA4P25789 261 aaKnown RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TACR3P29371 465 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 RRM2P31350 389 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 P2RX1P51575 399 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF41P51814 821 aaPredicted RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 ACTR3P61158 418 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TXNL4AP83876 142 aaKnown RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 CHRNB3Q05901 458 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 C17orf67Q0P5P2 114 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FOXO1Q12778 655 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 EPS8Q12929 822 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 CBFBQ13951 182 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 ELOAQ14241 798 aaKnown RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 RCN1Q15293 331 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FXNQ16595 210 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FAM98BQ52LJ0 330 aaKnown RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 DCST1Q5T197 706 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 RNF220Q5VTB9 566 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 PRAMEF8Q5VWM4 474 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 C1QL3Q5VWW1 255 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 PRAMEF7Q5VXH5 474 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TIGD3Q6B0B8 471 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 HMBOX1Q6NT76 420 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC30A6Q6NXT4 461 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 IGFL2Q6UWQ7 119 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 WDR88Q6ZMY6 472 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 GDF7Q7Z4P5 450 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMEM179BQ7Z7N9 219 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 NKAIN4Q8IVV8 208 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 GPALPP1Q8IXQ4 340 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 METTL25Q8N6Q8 603 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TEX19Q8NA77 164 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 Q8NA96 180 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 GOLM1Q8NBJ4 401 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMEM178AQ8NBL3 297 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 ICA1LQ8NDH6 482 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 FAM83FQ8NEG4 500 aaPredicted RBP6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 TOR1AIP2Q8NFQ8 470 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR5W2Q8NH69 310 aa6.85□□□□□ -1.31
SF3A3P1-201ENST00000446317 PFN4Q8NHR9 129 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms