RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 SLC7A7Q9UM01 511 aa11□□□□□ -0.65
FN1-212ENST00000446046 NOSIPQ9Y314 301 aaKnown RBP11□□□□□ -0.65
FN1-212ENST00000446046 LOC285095A0A1B0GVY8 99 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PCDH17O14917 1159 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 TYROBPO43914 113 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 F2RL1P55085 397 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 TAS2R20P59543 309 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MSMO1Q15800 293 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 RNASE10Q5GAN6 216 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 SLC6A19Q695T7 634 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 UTS2BQ765I0 119 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 OR4K13Q8NH42 304 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SGCZQ96LD1 299 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 GREB1Q4ZG55 1949 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CDHR4A6H8M9 788 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 NKX6-3A6NJ46 265 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ERVPABLB-1P60509 514 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 RPS26P62854 115 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 ZNF684Q5T5D7 378 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 AGAP7PQ5VUJ5 663 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SBSNQ6UWP8 590 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 AGAP4Q96P64 663 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 OR5B12Q96R08 314 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 HINT2Q9BX68 163 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SLC6A20Q9NP91 592 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 GJD2Q9UKL4 321 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 LDB3O75112 727 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 RAB3BP20337 219 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SLC2A5P22732 501 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ZNF140P52738 457 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 ATP1B3P54709 279 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 RBM39Q14498 530 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 MEF2DQ14814 521 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 DUSP6Q16828 381 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 GALNT10Q86SR1 603 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ALG8Q9BVK2 526 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 TK1P04183 234 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SERPINE2P07093 398 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MAP2K4P45985 399 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PLBD1Q6P4A8 553 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SMIM15Q7Z3B0 74 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 KLBQ86Z14 1044 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SLC35F2Q8IXU6 374 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MSLNLQ96KJ4 702 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ATPIF1Q9UII2 106 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ZNF443Q9Y2A4 671 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 A0A1B0GX78 115 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SHOXO15266 292 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SMAD6O43541 496 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 APOL3O95236 402 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CTBSQ01459 385 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 LTB4RQ15722 352 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 C14orf28Q4W4Y0 310 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 C6orf15Q6UXA7 325 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 TMEM174Q8WUU8 243 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 DPH2Q9BQC3 489 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 BCL7BQ9BQE9 202 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 BOCQ9BWV1 1114 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 HOXC11O43248 304 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 ZNF780AO75290 641 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 HTR3BO95264 441 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PPP1R3DO95685 299 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CKMT1AP12532 417 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CTHP32929 405 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ETV6P41212 452 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CCL11P51671 97 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 S100A12P80511 92 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MICAQ29983 383 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 IL20RBQ6UXL0 311 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SCD5Q86SK9 330 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 IGDCC3Q8IVU1 814 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 LILRB2Q8N423 598 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PDLIM5Q96HC4 596 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 SORCS2Q96PQ0 1159 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 NIPAL2Q9H841 368 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ZNF334Q9HCZ1 680 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 FBXL3Q9UKT7 428 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 MAB21L2Q9Y586 359 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SPTA1P02549 2419 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 EEF1E1-BLOC1S5C9J1V9 151 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 EEF1E1O43324 174 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 SERPINA5P05154 406 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 FUT1P19526 365 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CNR2P34972 360 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 ADH7P40394 386 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CSNK1EP49674 416 aaKnown RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 RPE65Q16518 533 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 TBC1D28Q2M2D7 210 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 CCNJQ5T5M9 372 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 LCN8Q6JVE9 175 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 SHISA6Q6ZSJ9 500 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 OR4N2Q8NGD1 307 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 UHRF1Q96T88 793 aaPredicted RBP10.99□□□□□ -0.65
FN1-212ENST00000446046 HSD3B7Q9H2F3 369 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 PRDM9Q9NQV7 894 aa10.99□□□□□ -0.65
FN1-212ENST00000446046 LTBP4Q8N2S1 1624 aa10.98□□□□□ -0.65
FN1-212ENST00000446046 CARD18P57730 90 aa10.98□□□□□ -0.65
FN1-212ENST00000446046 CST9Q5W186 159 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms