RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 DMRTC2Q8IXT2 367 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-205ENST00000444415 TMCO5AQ8N6Q1 288 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 TM9SF2Q99805 663 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 THUMPD3Q9BV44 507 aaKnown RBP19.61■□□□□ 0.73
TRAF4-205ENST00000444415 TMEM120AQ9BXJ8 343 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 IKZF5Q9H5V7 419 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 CCDC134Q9H6E4 229 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 TMEM45AQ9NWC5 275 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 VAPAQ9P0L0 249 aa19.61■□□□□ 0.73
TRAF4-205ENST00000444415 GPC6Q9Y625 555 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-205ENST00000444415 AGAP5A6NIR3 686 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SLC22A20A6NK97 555 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 EIF1AYO14602 144 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 AQP8O94778 261 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 NUDT14O95848 222 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 NCF2P19878 526 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CRATP43155 626 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 MAGEA8P43361 318 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SNTB1Q13884 538 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 PON3Q15166 354 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 GUSBP1Q15486 140 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 RGNQ15493 299 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 EIF3MQ7L2H7 374 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 TOR1AIP2Q8NFQ8 470 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 OR10D3Q8NH80 312 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SLC38A5Q8WUX1 472 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 ZFP3Q96NJ6 502 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SIKE1Q9BRV8 207 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 RSPO3Q9BXY4 272 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 RNF122Q9H9V4 155 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 MED4Q9NPJ6 270 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 A0A1W2PNV4 684 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CLIC1O00299 241 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 TNFSF11O14788 317 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CYP7B1O75881 506 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 NR2F1P10589 423 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 BMP2P12643 396 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 ELK4P28324 431 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 ADH6P28332 368 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 EIF1P41567 113 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 ASCL1P50553 236 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CCR4P51679 360 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 DSTNP60981 165 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 IRX1P78414 480 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 KCNJ10P78508 379 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 HPCAP84074 193 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SF3A3Q12874 501 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■■■□□ 14.7
TRAF4-205ENST00000444415 CBFBQ13951 182 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 RPS26P11Q5JNZ5 115 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 DLEU7Q6UYE1 221 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 RETREG3Q86VR2 466 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CNOT9Q92600 299 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SFXN3Q9BWM7 321 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 COQ10BQ9H8M1 238 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 DNAJB12Q9NXW2 375 aaKnown RBP19.6■□□□□ 0.73
TRAF4-205ENST00000444415 P2RX2Q9UBL9 471 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 SLC35A3Q9Y2D2 325 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 ZNF175Q9Y473 711 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 CHST2Q9Y4C5 530 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 GMEB1Q9Y692 573 aa19.6■□□□□ 0.73
TRAF4-205ENST00000444415 A0A1W2PP18 115 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 SYT5O00445 386 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 BCHEP06276 602 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 EIF1AXP47813 144 aaKnown RBP19.59■□□□□ 0.73
TRAF4-205ENST00000444415 ANXA11P50995 505 aaKnown RBP19.59■□□□□ 0.73
TRAF4-205ENST00000444415 EEFSECP57772 596 aaKnown RBP19.59■□□□□ 0.73
TRAF4-205ENST00000444415 VWA1Q6PCB0 445 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 LILRA2Q8N149 483 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 ARFGAP2Q8N6H7 521 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 MAL2Q969L2 176 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 TMEM19Q96HH6 336 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 MRGPRX4Q96LA9 322 aa19.59■□□□□ 0.73
TRAF4-205ENST00000444415 CXCL13O43927 109 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 SFTPDP35247 375 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 OPRM1P35372 400 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 KIR2DL2P43627 348 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-205ENST00000444415 SESN3P58005 492 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 ESPNLQ6ZVH7 1005 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 OR2V1Q8NHB1 315 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 KLHL15Q96M94 604 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 SRXN1Q9BYN0 137 aa19.58■□□□□ 0.72
TRAF4-205ENST00000444415 MTHFD2LQ9H903 347 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-205ENST00000444415 EXOSC3Q9NQT5 275 aaKnown RBP19.58■□□□□ 0.72
TRAF4-205ENST00000444415 AP3D1O14617 1153 aa19.57■□□□□ 0.72
TRAF4-205ENST00000444415 RPS3AP61247 264 aaKnown RBP19.57■□□□□ 0.72
TRAF4-205ENST00000444415 MRPL2Q5T653 305 aaKnown RBP19.57■□□□□ 0.72
TRAF4-205ENST00000444415 CHMP1BQ7LBR1 199 aa19.57■□□□□ 0.72
TRAF4-205ENST00000444415 VRK2Q86Y07 508 aa19.57■□□□□ 0.72
TRAF4-205ENST00000444415 RNASE6Q93091 150 aaKnown RBP19.57■□□□□ 0.72
TRAF4-205ENST00000444415 STARD4Q96DR4 205 aa19.57■□□□□ 0.72
TRAF4-205ENST00000444415 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-205ENST00000444415 RLIMQ9NVW2 624 aa19.57■□□□□ 0.72
TRAF4-205ENST00000444415 FREM1Q5H8C1 2179 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 EEF1E1-BLOC1S5C9J1V9 151 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 EEF1E1O43324 174 aaKnown RBP19.56■□□□□ 0.72
TRAF4-205ENST00000444415 ATP8B1O43520 1251 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 KRTAP10-9P60411 292 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 FADDQ13158 208 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 HSP90B2PQ58FF3 399 aa19.56■□□□□ 0.72
TRAF4-205ENST00000444415 P4HA3Q7Z4N8 544 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms