RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TMEM221A6NGB7 291 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 SAGE2PA6NJ88 616 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 A8MUA0 341 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 M0R296 226 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 CCRL2O00421 344 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 KPNA4O00629 521 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 AIREO43918 545 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 UTS2O95399 124 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 NTN1O95631 604 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF883P0CG24 379 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 PNMTP11086 282 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF182P17025 639 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 MAKP20794 623 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 LIPAP38571 399 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 MTNR1AP48039 350 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 RNF144AP50876 292 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TUBA1BP68363 451 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 SKP2Q13309 424 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TMED1Q13445 227 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 MED22Q15528 200 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 DGUOKQ16854 277 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 NKAIN1Q4KMZ8 207 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 VWA2Q5GFL6 755 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 HSDL2Q6YN16 418 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 LNX2Q8N448 690 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TMCO5AQ8N6Q1 288 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 OR13C2Q8NGS9 318 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TBC1D15Q8TC07 691 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 STT3BQ8TCJ2 826 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 CLIP3Q96DZ5 547 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 RNFT2Q96EX2 444 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 SAMD8Q96LT4 415 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 NUDT9Q9BW91 350 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 JAM3Q9BX67 310 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 UBQLN3Q9H347 655 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 HHATLQ9HCP6 504 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 TAS2R16Q9NYV7 291 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 SIGLEC7Q9Y286 467 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
CPSF4-206ENST00000441580 KNL1Q8NG31 2342 aa12.11□□□□□ -0.47
CPSF4-206ENST00000441580 A0A087WUJ7 227 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 TMEM129A0AVI4 362 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 RIIAD1A6NNX1 92 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 BHLHE40O14503 412 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF264O43296 627 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CPNE3O75131 537 aaKnown RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CSO75390 466 aaKnown RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 IFNGP01579 166 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 SCG5P05408 212 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 HEXBP07686 556 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZGLP1P0C6A0 271 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CDK4P11802 303 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF3P17036 446 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 HTR1FP30939 366 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 UGT2B10P36537 528 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 RGS6P49758 472 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 MLLT11Q13015 90 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 LINC00114Q6XXX2 140 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CXXC5Q7LFL8 322 aaKnown RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF321PQ8N8H1 164 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF441Q8N8Z8 693 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 OR52I1Q8NGK6 324 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 METTL21AQ8WXB1 218 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 LGALS12Q96DT0 336 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 SGTBQ96EQ0 304 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 MGLLQ99685 303 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 PLGRKTQ9HBL7 147 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 PALMDQ9NP74 551 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ISYNA1Q9NPH2 558 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 C20orf141Q9NUB4 165 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 NXT1Q9UKK6 140 aaKnown RBP12.1□□□□□ -0.47
CPSF4-206ENST00000441580 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
CPSF4-206ENST00000441580 FER1L5A0AVI2 2057 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ARID1BQ8NFD5 2236 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ELOA3DA6NLF2 546 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 TMX2-CTNND1H3BSU7 103 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ICOSLGO75144 302 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 ALOX12BO75342 701 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 GP1BAP07359 652 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 HSMCR30P0CW71 290 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 FGF5P12034 268 aa12.09□□□□□ -0.47
CPSF4-206ENST00000441580 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
CPSF4-206ENST00000441580 GADD45AP24522 165 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms