RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 BMP8BP34820 402 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CPOXP36551 454 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 RAG2P55895 527 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 DLX5P56178 289 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CYP1B1Q16678 543 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CATSPEREQ5SY80 951 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 RWDD4Q6NW29 188 aaKnown RBP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 BMP8AQ7Z5Y6 402 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CRLF3Q8IUI8 442 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 GABRG1Q8N1C3 465 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 C16orf92Q96LL3 132 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 SLC46A2Q9BY10 475 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 RAB9BQ9NP90 201 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 PLEKHJ1Q9NW61 149 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 EPHA6Q9UF33 1036 aa9.75□□□□□ -0.85
SYNE2-206ENST00000441438 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
SYNE2-206ENST00000441438 ANKRD30BLA7E2S9 258 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 STBD1O95210 358 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SDHAP31040 664 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 MYBPC1Q00872 1141 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 MSS51Q4VC12 460 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 ULK3Q6PHR2 472 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 MBOAT1Q6ZNC8 495 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RAB43Q86YS6 212 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 PGAM4Q8N0Y7 254 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 CLIP4Q8N3C7 705 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 PXT1Q8NFP0 134 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 OR10K1Q8NGX5 313 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SYT11Q9BT88 431 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 MTMR10Q9NXD2 777 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM9Q9P0T7 183 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 OR12D3Q9UGF7 316 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 LGALS13Q9UHV8 139 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 GPR160Q9UJ42 338 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 AZIN1O14977 448 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 DHHO43323 396 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 TIMM8AO60220 97 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 EFEMP2O95967 443 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SERPIND1P05546 499 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 UCHL3P15374 230 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SLC18A1P54219 525 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RELBQ01201 579 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 GPR19Q15760 415 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RNF212Q495C1 297 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 AKIRIN2Q53H80 203 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 GLDNQ6ZMI3 551 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 DEF8Q6ZN54 512 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 CENPUQ71F23 418 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 APCDD1Q8J025 514 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 HJURPQ8NCD3 748 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 ALG8Q9BVK2 526 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 NT5DC2Q9H857 520 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RHCGQ9UBD6 479 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 KCNIP3Q9Y2W7 256 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 PCDHA2Q9Y5H9 948 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 ADGRA3Q8IWK6 1321 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 A0A0G2JMP0 313 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 A0A0X1KG70 313 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 TMEM213A2RRL7 107 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 CCDC160A6NGH7 325 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 DISC1C4P0D8 188 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 PHYHO14832 338 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 FADS1O60427 444 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SDC3O75056 442 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RCBTB2O95199 551 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 FADS2O95864 444 aaKnown RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 ACSM4P0C7M7 580 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 MALP21145 153 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 VHLP40337 213 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SPRYD7Q5W111 196 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 FAM198BQ6UWH4 519 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 RSPO2Q6UXX9 243 aaPredicted RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 CTU1Q7Z7A3 348 aaKnown RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 KCNMB4Q86W47 210 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 SLC44A3Q8N4M1 653 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 OR4C5Q8NGB2 326 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 ACER1Q8TDN7 264 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 TSNAXQ99598 290 aaKnown RBP9.74□□□□□ -0.85
SYNE2-206ENST00000441438 EGFL8Q99944 293 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 C1orf109Q9NX04 203 aa9.74□□□□□ -0.85
SYNE2-206ENST00000441438 XRCC2O43543 280 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 OR2J2O76002 312 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 GM2AP17900 193 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 COMTP21964 271 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 FMO3P31513 532 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 FAM3AP98173 230 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 RBBP7Q16576 425 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 TSTD2Q5T7W7 516 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 LINGO2Q7L985 606 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 PIM3Q86V86 326 aa9.73□□□□□ -0.85
SYNE2-206ENST00000441438 TTC9BQ8N6N2 239 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms