RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 UBQLNLQ8IYU4 475 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 METTL25Q8N6Q8 603 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 OR10A6Q8NH74 314 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 FBXO27Q8NI29 283 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ITLN2Q8WWU7 325 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 TUBA1CQ9BQE3 449 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 TMEM38AQ9H6F2 299 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 KAT8Q9H7Z6 458 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ADAM21Q9UKJ8 722 aa17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF443Q9Y2A4 671 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-206ENST00000439487 C7orf72A4D263 438 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 H0YC42 278 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 AIM2O14862 343 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 SEC14L5O43304 696 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 DNAJA2O60884 412 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 OPN1LWP04000 364 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 PRKCAP17252 672 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 PGCP20142 388 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 IL11P20809 199 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 SLC6A2P23975 617 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 PSMA4P25789 261 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 RYKP34925 604 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 PTGER4P35408 488 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 SUCLG1P53597 346 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 TPD52P55327 224 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 BCL2A1Q16548 175 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 LIN52Q52LA3 116 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 OR8J3Q8NGG0 315 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 ZPLD1Q8TCW7 415 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 TRIB1Q96RU8 372 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 PIF1Q9H611 641 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 EXOSC3Q9NQT5 275 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 RLIMQ9NVW2 624 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 DNAJB12Q9NXW2 375 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF232Q9UNY5 417 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 AP4B1Q9Y6B7 739 aa17.57■□□□□ 0.4
SEMA3B-206ENST00000439487 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 EFNA2O43921 213 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 SHOX2O60902 331 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 ADAM11O75078 769 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 EPPINO95925 133 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 THBS1P07996 1170 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 PABPC4LP0CB38 370 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 EIF1P41567 113 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 GZMMP51124 257 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 SMSP52788 366 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CLDN15P56746 228 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CLDN20P56880 219 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 EEF1A1P68104 462 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 LARS2Q15031 903 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF311Q5JNZ3 666 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 PLXDC2Q6UX71 529 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 SEM1Q6ZVN7 128 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 NET1Q7Z628 596 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 LURAP1LQ8IV03 231 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 ZZZ3Q8IYH5 903 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CLIP4Q8N3C7 705 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 C11orf65Q8NCR3 313 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 HIPK4Q8NE63 616 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 OR10Q1Q8NGQ4 319 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 RND1Q92730 232 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 SH3GL1Q99961 368 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CACYBPQ9HB71 228 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 IFT52Q9Y366 437 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CHST2Q9Y4C5 530 aa17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 GPC6Q9Y625 555 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-206ENST00000439487 CDHR4A6H8M9 788 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 AP3D1O14617 1153 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 FAM107AO95990 144 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 ETS2P15036 469 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 AQP1P29972 269 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 SESN3P58005 492 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 RBBP4Q09028 425 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 SF3B4Q15427 424 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■■□□ 17.4
SEMA3B-206ENST00000439487 SLC25A53Q5H9E4 307 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 NSUN5P2Q63ZY6 315 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 SERPINA11Q86U17 422 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF808Q8N4W9 903 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 MEIOBQ8N635 442 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 ZNF563Q8TA94 476 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 CMTM5Q96DZ9 223 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 MRGPRX4Q96LA9 322 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 ECSITQ9BQ95 431 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 SPATA9Q9BWV2 254 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 RSPO3Q9BXY4 272 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 TMEM185BQ9H7F4 350 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 EFCAB1Q9HAE3 211 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 RNF6Q9Y252 685 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 ANGPT4Q9Y264 503 aa17.55■□□□□ 0.4
SEMA3B-206ENST00000439487 HCFC1P51610 2035 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 A1L4Q6 167 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 CLCA1A8K7I4 914 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 NTN1O95631 604 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 GKN3PP0CG01 181 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 ADH6P28332 368 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 SLC6A8P48029 635 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 RAC1P63000 192 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 CDSNQ15517 529 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 RNF220Q5VTB9 566 aa17.54■□□□□ 0.4
SEMA3B-206ENST00000439487 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms