RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GHRLQ9UBU3 117 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 RSPH14Q9UHP6 348 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 VSIG4Q9Y279 399 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 COMMD3-BMI1R4GMX3 469 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 ABCC4O15439 1325 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 NINLQ9Y2I6 1382 aa2.87□□□□□ -1.95
LSM1P1-201ENST00000438629 CUX2O14529 1486 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MBLAC1A4D2B0 266 aaPredicted RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 CCT8L1PA6NM43 557 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 A8MX80 341 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 G3V3Y1 287 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 GOLGA6L19H0YKK7 550 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SAP18O00422 153 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF208O43345 1280 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MED7O43513 233 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SDC3O75056 442 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 IL1BP01584 269 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 FGF4P08620 206 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC2A3P11169 496 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PSMA2P25787 234 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PRDX6P30041 224 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 RFC2P35250 354 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 HTR2BP41595 481 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 STK19P49842 368 aaPredicted RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC25A1P53007 311 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MRPS6P82932 125 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 CBX1P83916 185 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PAX2Q02962 417 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 CSTF1Q05048 431 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 IL18Q14116 193 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SNCBQ16143 134 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 AANATQ16613 207 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 EXOC3L2Q2M3D2 409 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 CYBRD1Q53TN4 286 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF311Q5JNZ3 666 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 ARMC12Q5T9G4 340 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SEL1L2Q5TEA6 688 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MEDAGQ5VYS4 303 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 NCCRP1Q6ZVX7 275 aaPredicted RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 C12orf56Q8IXR9 622 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 Q8N9G6 341 aaPredicted RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MINDY2Q8NBR6 621 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 KLHL30-AS1Q8NEE0 82 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 OR9A1PQ8NGU1 263 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 OR2T3Q8NH03 318 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 RFESDQ8TAC1 157 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PIBF1Q8WXW3 757 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC35B4Q969S0 331 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 RAB3CQ96E17 227 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 CCT8L2Q96SF2 557 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 EDEM2Q9BV94 578 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 LY9Q9HBG7 655 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 EXOSC3Q9NQT5 275 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 AGPAT3Q9NRZ7 376 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 AGPAT5Q9NUQ2 364 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PRR34Q9NV39 138 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 DUS2Q9NX74 493 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 RNF14Q9UBS8 474 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 PRODH2Q9UF12 536 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 IL20RAQ9UHF4 553 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 ANGPTL2Q9UKU9 493 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 MRPS33Q9Y291 106 aaKnown RBP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 OR10H1Q9Y4A9 318 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 TIMM22Q9Y584 194 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 AP4B1Q9Y6B7 739 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 GON4LQ3T8J9 2241 aa2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 SF3B1O75533 1304 aaKnown RBP eCLIP2.86□□□□□ -1.95
LSM1P1-201ENST00000438629 RALGAPA1Q6GYQ0 2036 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 AGRNO00468 2067 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 IQANK1A0A1B0GTG1 560 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 SERTM2A0A1B0GWG4 89 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 TTC26A0AVF1 554 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 HEATR9A2RTY3 570 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 HELTA6NFD8 242 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF716A6NP11 495 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF879B4DU55 563 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 WRBO00258 174 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 TRDMT1O14717 391 aaKnown RBP2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 RAMP1O60894 148 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 SCGNO76038 276 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 KLHL2O95198 593 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 NDUFB10O96000 172 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 WNT2P09544 360 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF735P0CB33 412 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 DBTP11182 482 aaKnown RBP2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 RALBP11234 206 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 LAMP1P11279 417 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF44P15621 663 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ADRA1AP35348 466 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 PSMD7P51665 324 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 SUCLG1P53597 346 aaKnown RBP2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 EIF3EP60228 445 aaKnown RBP2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 UBE2HP62256 183 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 TPM4P67936 248 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF33BQ06732 778 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 DNAJC3Q13217 504 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC10A1Q14973 349 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 NCF4Q15080 339 aa2.85□□□□□ -1.95
LSM1P1-201ENST00000438629 RAB35Q15286 201 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms