RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 ADAM11O75078 769 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 CLDN1O95832 211 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 EPPINO95925 133 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 SLC6A2P23975 617 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 BCL2A1Q16548 175 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 LIN52Q52LA3 116 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 REEP3Q6NUK4 255 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 PIGWQ7Z7B1 504 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 LSRQ86X29 649 aaPredicted RBP21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 PTOV1Q86YD1 416 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 PCYOX1LQ8NBM8 494 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 OR10A6Q8NH74 314 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 ZNF563Q8TA94 476 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 ZPLD1Q8TCW7 415 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 PMM1Q92871 262 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 TMEM38AQ9H6F2 299 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 KAT8Q9H7Z6 458 aaKnown RBP21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 COQ3Q9NZJ6 369 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 AP4B1Q9Y6B7 739 aa21.5■■□□□ 1.03
RBFOX2-209ENST00000438146 A0A0G2JNJ9 132 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 AP3D1O14617 1153 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 PGCP20142 388 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 EIF1P41567 113 aaKnown RBP21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 LARS2Q15031 903 aaKnown RBP21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 ZNF311Q5JNZ3 666 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 POMZP3Q6PJE2 187 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 CMIPQ8IY22 773 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 CLIP4Q8N3C7 705 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 TNIP2Q8NFZ5 429 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 CCT8L2Q96SF2 557 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 GID8Q9NWU2 228 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 Q9UFV3 132 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 ZNF232Q9UNY5 417 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 ARL2BPQ9Y2Y0 163 aa21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 GPC6Q9Y625 555 aaPredicted RBP21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 DIDO1Q9BTC0 2240 aaKnown RBP21.49■■□□□ 1.03
RBFOX2-209ENST00000438146 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 EIF1AYO14602 144 aaKnown RBP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 EFNA2O43921 213 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 TOXO94900 526 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 GKN3PP0CG01 181 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 SFTPDP35247 375 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 SESN3P58005 492 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 EEF1A1P68104 462 aaKnown RBP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 SF3B4Q15427 424 aaKnown RBP eCLIP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 PRAMEF8Q5VWM4 474 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 PRAMEF7Q5VXH5 474 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 NSUN5P2Q63ZY6 315 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 XKRXQ6PP77 449 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 CHMP1BQ7LBR1 199 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 GGNQ86UU5 652 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 LACC1Q8IV20 430 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 ZNF845Q96IR2 970 aaPredicted RBP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 EXOSC3Q9NQT5 275 aaKnown RBP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 CDHR4A6H8M9 788 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 DNAJA2O60884 412 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 THBS1P07996 1170 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 PABPC4LP0CB38 370 aaKnown RBP21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 ME2P23368 584 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 SHC1P29353 583 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 PPP4R4Q6NUP7 873 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 ZZZ3Q8IYH5 903 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 LILRA2Q8N149 483 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 METTL25Q8N6Q8 603 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 C9orf106Q8NAJ2 232 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 C11orf65Q8NCR3 313 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 HIPK4Q8NE63 616 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 MRGPRX4Q96LA9 322 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 PINK1Q9BXM7 581 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 ANGPT4Q9Y264 503 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 IFT52Q9Y366 437 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 CHST2Q9Y4C5 530 aa21.48■■□□□ 1.03
RBFOX2-209ENST00000438146 CD8B2A6NJW9 211 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 FAM90A27PA6NNH2 459 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 NPPAP01160 153 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 IDH2P48735 452 aaKnown RBP21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 RAC1P63000 192 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 MERTKQ12866 999 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 HIST2H2BCQ6DN03 193 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 KRT73Q86Y46 540 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 GRAMD2AQ8IUY3 354 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 NAXEQ8NCW5 288 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 OR8J3Q8NGG0 315 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 CA5BP1Q8WTZ4 195 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 SH3GL1Q99961 368 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 ECSITQ9BQ95 431 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 SPATA9Q9BWV2 254 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 PLEKHB1Q9UF11 243 aaPredicted RBP21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 USP22Q9UPT9 525 aa21.47■■□□□ 1.03
RBFOX2-209ENST00000438146 UTP20O75691 2785 aaKnown RBP21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 DOPEY2Q9Y3R5 2298 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 CFAP73A6NFT4 308 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 TNFSF11O14788 317 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 FRS3O43559 492 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 NTN1O95631 604 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 ETS2P15036 469 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 ADH6P28332 368 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 EIF1AXP47813 144 aaKnown RBP21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 SLC6A8P48029 635 aa21.46■■□□□ 1.03
RBFOX2-209ENST00000438146 EEFSECP57772 596 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms