RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ERCC6LQ2NKX8 1250 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 GRAMD1BQ3KR37 738 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 TMEM176BQ3YBM2 270 aaPredicted RBP10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 VHLLQ6RSH7 139 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 UBE2J2Q8N2K1 259 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 SIGLECL1Q8N7X8 197 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ATP6V1C2Q8NEY4 427 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 OR7G2Q8NG99 324 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 OR51F2Q8NH61 342 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 UBASH3BQ8TF42 649 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 MUS81Q96NY9 551 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CCT8L2Q96SF2 557 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 CA10Q9NS85 328 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 RNF11Q9Y3C5 154 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 ZNF780BQ9Y6R6 833 aa10.65□□□□□ -0.7
SMAD9-IT1-201ENST00000437983 DNAJC9-AS1A6NH13 148 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 FOXE1O00358 373 aaPredicted RBP10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PHGDHO43175 533 aaKnown RBP10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 IGKV1D-16P01601 117 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 S100BP04271 92 aaPredicted RBP10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PSPHP78330 225 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 RASGEF1BQ0VAM2 473 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 CYP27C1Q4G0S4 372 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 C9orf135Q5VTT2 229 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LIPJQ5W064 366 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 FBXW9Q5XUX1 488 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LEG1Q6P5S2 330 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LRRC8AQ8IWT6 810 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SLC43A2Q8N370 569 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 NEU4Q8WWR8 484 aaPredicted RBP10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 CFAP36Q96G28 342 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SH3YL1Q96HL8 342 aaPredicted RBP10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 RACGAP1Q9H0H5 632 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PFDN4Q9NQP4 134 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 KLHL9Q9P2J3 617 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 UTS2RQ9UKP6 389 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ICAM5Q9UMF0 924 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PIN1P1O15428 100 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SEMA3DO95025 777 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PRSS23O95084 383 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ITGA5P08648 1049 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 OMGP23515 440 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 NTF4P34130 210 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 KHKP50053 298 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ZNF41P51814 821 aaPredicted RBP10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 IL1RL1Q01638 556 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SLC18A2Q05940 514 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 FOXF1Q12946 379 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 EFNB3Q15768 340 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 DECR1Q16698 335 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 EDARADDQ8WWZ3 215 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 DVL3Q92997 716 aaPredicted RBP10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SERPINI1Q99574 410 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 NTN4Q9HB63 628 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ADAM29Q9UKF5 820 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PSME2Q9UL46 239 aa10.63□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LOC100653049A0A140TA62 436 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 GXYLT2A0PJZ3 443 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SH3PXD2BA1X283 911 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 UBXN8O00124 270 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ZNF195O14628 629 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 CYTIPO60759 359 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PIAS1O75925 651 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 KRT34O76011 436 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LINGO3P0C6S8 592 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 LMO4P61968 165 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 FAM219BQ5XKK7 198 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 COMMD6Q7Z4G1 85 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 GALNT5Q7Z7M9 940 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 METTL4Q8N3J2 472 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 OR52E4Q8NGH9 312 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 OR4C3Q8NH37 302 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 UBTD2Q8WUN7 234 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ERP27Q96DN0 273 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 MRGPRX4Q96LA9 322 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 DOK1Q99704 481 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ALG9Q9H6U8 611 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 POPDC3Q9HBV1 291 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SLC17A5Q9NRA2 495 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 TAS2R16Q9NYV7 291 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 TAS2R9Q9NYW1 312 aa10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 MTO1Q9Y2Z2 717 aaKnown RBP10.62□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ZNF724A8MTY0 619 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SUPT3HB4E1H0 165 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PLOD3O60568 738 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SUPT3HO75486 399 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 SAGP10523 405 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 COL8A2P25067 703 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 PRIM2P49643 509 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ATP6V0D1P61421 351 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ZP4Q12836 540 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 ADRM1Q16186 407 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 RNASEH2BQ5TBB1 312 aaKnown RBP10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
SMAD9-IT1-201ENST00000437983 NANPQ8TBE9 248 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms