RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CAMTA1Q9Y6Y1 1673 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CDC42BPGQ6DT37 1551 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 FRMPD3Q5JV73 1810 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 TRABD2BA6NFA1 517 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 OR7A17O14581 309 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 GMFGO60234 142 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 LCMT2O60294 686 aaKnown RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SRPX2O60687 465 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF354AO60765 605 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SH3BGRLO75368 114 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 RHOBTB1O94844 696 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 KIAA0754O94854 1291 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC2A10O95528 541 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 F10P00742 488 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PIGRP01833 764 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 IGHG4P01861 327 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SERPINB2P05120 415 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CD55P08174 381 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 HBQ1P09105 142 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ALPIP09923 528 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 H2AFZP0C0S5 128 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 GATA1P15976 413 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ATP6V1C1P21283 382 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 IGHV1-2P23083 117 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 GATA2P23769 480 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CD80P33681 288 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PRPHP41219 470 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 NOVA1P51513 510 aaKnown RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 LIM2P55344 173 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 OSTNP61366 133 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 NTHL1P78549 312 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PAX2Q02962 417 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 DEFB115Q30KQ5 88 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 TCTEX1D4Q5JR98 221 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CFAP157Q5JU67 520 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLX4IPQ5VYV7 408 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 WSCD1Q658N2 575 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAHD2BQ6P2I3 314 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 RGS9BPQ6ZS82 235 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 HIPK1Q86Z02 1210 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CNPY4Q8N129 248 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CLDN19Q8N6F1 224 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SYT14Q8NB59 555 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PNPT1Q8TCS8 783 aaKnown RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PIGCQ92535 297 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 FAHD2AQ96GK7 314 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 AMDHD1Q96NU7 426 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 FOXN4Q96NZ1 517 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SLC6A7Q99884 636 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 DPH7Q9BTV6 452 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 GSDMCQ9BYG8 508 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 APMAPQ9HDC9 416 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SMOXQ9NWM0 555 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ARMCX1Q9P291 453 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 GNG12Q9UBI6 72 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 RNF14Q9UBS8 474 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ZNF221Q9UK13 617 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SNX6Q9UNH7 406 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SAMD4AQ9UPU9 718 aaKnown RBP2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 ASB3Q9Y575 518 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 NWD2Q9ULI1 1742 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 PTPN23Q9H3S7 1636 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 TECPR2O15040 1411 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 CRB1P82279 1406 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 TNS2Q63HR2 1409 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 SSH2Q76I76 1423 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 FRMPD4Q14CM0 1322 aa2.41□□□□□ -2.02
HMGB1P27-201ENST00000431429 BRWD3Q6RI45 1802 aa2.4□□□□□ -2.02
HMGB1P27-201ENST00000431429 CEP152O94986 1710 aa2.4□□□□□ -2.02
HMGB1P27-201ENST00000431429 SHANK3Q9BYB0 1731 aa2.4□□□□□ -2.02
HMGB1P27-201ENST00000431429 GOLGB1Q14789 3259 aaKnown RBP2.4□□□□□ -2.02
HMGB1P27-201ENST00000431429 CPDO75976 1380 aa2.4□□□□□ -2.02
HMGB1P27-201ENST00000431429 TRAV9-2A0A087WT02 112 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 SYNJ2BP-COX16A0A087WUM0 186 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 A0A087WWV3 80 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 IGHV3-35A0A0C4DH35 117 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 SAGE2PA6NJ88 616 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PP2D1A8MPX8 630 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 NPIPA7E9PJI5 369 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 G3V3Y1 287 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PRRG1O14668 218 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ARPC3O15145 178 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 TAPBPO15533 448 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PHF1O43189 567 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 RIPK2O43353 540 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 BCL2L11O43521 198 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 HPP00738 406 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 H2BFMP0C1H6 154 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 NPIPA8P0DM63 369 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 GCFC2P16383 781 aaKnown RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 CAPN2P17655 700 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAGEA5P43359 124 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 KRTAP10-9P60411 292 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 MS4A2Q01362 244 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZFP36L1Q07352 338 aaKnown RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 KRTAP1-1Q07627 177 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 RAB40BQ12829 278 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms