RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 HRO43593 1189 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 PLRG1O43660 514 aaKnown RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 OR2B3O76000 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SERPINA3P01011 423 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 HOXC4P09017 264 aaPredicted RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 SBK2P0C263 348 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 AHCYP23526 432 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 HTR2AP28223 471 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 THBS2P35442 1172 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 POU4F2Q12837 409 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 KIR2DS3Q14952 304 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 AMZ1Q400G9 498 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 KLHL12Q53G59 568 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 PLA1AQ53H76 456 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 MRPL2Q5T653 305 aaKnown RBP10.48□□□□□ -0.73
USP4-205ENST00000431357 FHL5Q5TD97 284 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 FBXO42Q6P3S6 717 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ZNF613Q6PF04 617 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ARL9Q6T311 187 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 KCTD20Q7Z5Y7 419 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ABI3BPQ7Z7G0 1075 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 NR2C2APQ86WQ0 139 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 GHDCQ8N2G8 530 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SLC44A3Q8N4M1 653 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 OR4M1Q8NGD0 313 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ABHD4Q8TB40 342 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ART5Q96L15 291 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 IFT27Q9BW83 186 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 TMEM27Q9HBJ8 222 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 ATP13A2Q9NQ11 1180 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 WDR70Q9NW82 654 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 NCKAP1Q9Y2A7 1128 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SLC22A7Q9Y694 548 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 SPACA6W5XKT8 324 aa10.48□□□□□ -0.73
USP4-205ENST00000431357 CDHR4A6H8M9 788 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 PRR23AA6NEV1 266 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 BTN3A3O00478 584 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 TNFSF14O43557 240 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 FCARP24071 287 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 RPS7P62081 194 aaKnown RBP10.47□□□□□ -0.73
USP4-205ENST00000431357 SIM1P81133 766 aaPredicted RBP10.47□□□□□ -0.73
USP4-205ENST00000431357 RUNX2Q13950 521 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 GAS6Q14393 721 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 BTBD16Q32M84 506 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 TMEM240Q5SV17 173 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 TANGO2Q6ICL3 276 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 ABHD13Q7L211 337 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 CEACAM19Q7Z692 300 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 PXKQ7Z7A4 578 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 YAF2Q8IY57 180 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 SAMD12Q8N8I0 201 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 COX18Q8N8Q8 333 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 CAMKVQ8NCB2 501 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 OR4C6Q8NH72 309 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 PFN4Q8NHR9 129 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 PTP4A1Q93096 173 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 FAM131CQ96AQ9 280 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 TBX5Q99593 518 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 ZNF559Q9BR84 538 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 ABCG5Q9H222 651 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 SRMSQ9H3Y6 488 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 MED20Q9H944 212 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 GALNT9Q9HCQ5 603 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 LYRM4Q9HD34 91 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 RASD1Q9Y272 281 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 SIGLEC7Q9Y286 467 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 CACNG2Q9Y698 323 aa10.47□□□□□ -0.73
USP4-205ENST00000431357 SC5DO75845 299 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 SOX30O94993 753 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 IFNGP01579 166 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 EIF4EP06730 217 aaKnown RBP10.46□□□□□ -0.73
USP4-205ENST00000431357 PRG2P13727 222 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 ZNF3P17036 446 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 AGFG1P52594 562 aaKnown RBP10.46□□□□□ -0.73
USP4-205ENST00000431357 BLVRAP53004 296 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 NRG3P56975 720 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 CLDN2P57739 230 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 PITPNAQ00169 270 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 CCDC85BQ15834 202 aaPredicted RBP10.46□□□□□ -0.73
USP4-205ENST00000431357 MAPK14Q16539 360 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 HSD17B12Q53GQ0 312 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 WDR88Q6ZMY6 472 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 GLRX5Q86SX6 157 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 OR14C36Q8NHC7 312 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 ASB12Q8WXK4 309 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 LRFN5Q96NI6 719 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 OR2A5Q96R48 311 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 DPAGT1Q9H3H5 408 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 SFXN1Q9H9B4 322 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 SCPEP1Q9HB40 452 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 ADAP2Q9NPF8 381 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 ABRACLQ9P1F3 81 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 ING4Q9UNL4 249 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 NUBP2Q9Y5Y2 271 aa10.46□□□□□ -0.73
USP4-205ENST00000431357 TRAV1-2A0A0B4J238 106 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms