RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
SSR4P1-202ENST00000429427 FOXD3Q9UJU5 478 aaPredicted RBP16.22■□□□□ 0.19
SSR4P1-202ENST00000429427 CTAG2O75638 210 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 TGDSO95455 350 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 NUDT14O95848 222 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 AGR2O95994 175 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 UBTFL6P0CB48 400 aaPredicted RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 ELK4P28324 431 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 CCKARP32238 428 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 SFTPDP35247 375 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 EIF1P41567 113 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 AQP5P55064 265 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 RPS3AP61247 264 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 SORDQ00796 357 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 ESPNLQ6ZVH7 1005 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 MIER2Q8N344 545 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 TMCO5AQ8N6Q1 288 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 TRIML2Q8N7C3 387 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 LINC01560Q8TB33 94 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 GTF2H4Q92759 462 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 KLHL15Q96M94 604 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 TRNT1Q96Q11 434 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 THUMPD3Q9BV44 507 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 SRXN1Q9BYN0 137 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 OPN3Q9H1Y3 402 aaPredicted RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 PIGMQ9H3S5 423 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 COQ10BQ9H8M1 238 aa16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 INTS9Q9NV88 658 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 GPC6Q9Y625 555 aaPredicted RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 TEP1Q99973 2627 aaKnown RBP16.21■□□□□ 0.19
SSR4P1-202ENST00000429427 FAM234BA2RU67 622 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 CSTAP01040 98 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 ZCCHC18P0CG32 403 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 ADH6P28332 368 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 CCR4P51679 360 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 LRRC74AQ0VAA2 488 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 SGCBQ16585 318 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 GPAT3Q53EU6 434 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 HBMQ6B0K9 141 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 SLC2A7Q6PXP3 512 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 MSANTD1Q6ZTZ1 278 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 TOR1AIP2Q8NFQ8 470 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 MRGPRX4Q96LA9 322 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 GPATCH1Q9BRR8 931 aaKnown RBP16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 PAIP1Q9H074 479 aaKnown RBP16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 CLEC4AQ9UMR7 237 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 MPDZO75970 2070 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 ABCA4P78363 2273 aa16.2■□□□□ 0.18
SSR4P1-202ENST00000429427 AGAP5A6NIR3 686 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 MSTNO14793 375 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 POLR3GO15318 223 aaPredicted RBP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 CYP7B1O75881 506 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 SMNDC1O75940 238 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 ETFAP13804 333 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 RPS4Y1P22090 263 aaKnown RBP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 FAM27E3Q08E93 113 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 CBFBQ13951 182 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 EIF3MQ7L2H7 374 aaKnown RBP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 TMEM200AQ86VY9 491 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 MSRB3Q8IXL7 192 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 FAM222BQ8WU58 562 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 DYDC1Q8WWB3 177 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 CNOT9Q92600 299 aaKnown RBP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 OSTF1Q92882 214 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 THOC1Q96FV9 657 aaKnown RBP16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 MAGEB18Q96M61 343 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 CCDC28BQ9BUN5 200 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 TPT1P8Q9HAU6 139 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
SSR4P1-202ENST00000429427 HIVEP1P15822 2718 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 TUBAL3A6NHL2 446 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 A6NNC1 897 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 SS18L1O75177 396 aaPredicted RBP16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 FCGR2AP12318 317 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 KLK2P20151 261 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 CAPN3P20807 821 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ME2P23368 584 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 CPOXP36551 454 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 CPA2P48052 419 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 SESN3P58005 492 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ZNF239Q16600 458 aaKnown RBP16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 TMEM176BQ3YBM2 270 aaPredicted RBP16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 PPP4R4Q6NUP7 873 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 BLOC1S3Q6QNY0 202 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 LRRC74BQ6ZQY2 392 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 FAM214BQ7L5A3 538 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 CDH24Q86UP0 819 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ZNF610Q8N9Z0 462 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ATP6V1C2Q8NEY4 427 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 OIT3Q8WWZ8 545 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ROBO4Q8WZ75 1007 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 LRRC46Q96FV0 321 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 ITCHQ96J02 903 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 RASSF1Q9NS23 344 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 SLC25A37Q9NYZ2 338 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 SLAMF8Q9P0V8 285 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 LIPT1Q9Y234 373 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 PCDHB14Q9Y5E9 798 aa16.18■□□□□ 0.18
SSR4P1-202ENST00000429427 DSPPQ9NZW4 1301 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms