RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TFR2Q9UP52 801 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 VWA7Q9Y334 891 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 AUP1Q9Y679 476 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
SDCBP-203ENST00000424270 IGHV1-18A0A0C4DH31 117 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 A0A1W2PNR3 127 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 ISPDA4D126 451 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 C3orf84H3BNL1 204 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 M0R233 179 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TPD52L2O43399 206 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 CDC14BO60729 498 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 KRT33AO76009 404 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 UTS2O95399 124 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OPN1MWP04001 364 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 KLK1P06870 262 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OPN1MW2P0DN77 364 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OPN1MW3P0DN78 364 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TIA1P31483 386 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■■□□□ 13.9
SDCBP-203ENST00000424270 THBS4P35443 961 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 EIF1P41567 113 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 PIK3CBP42338 1070 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 MAPK12P53778 367 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 WDR4P57081 412 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 KRTAP10-3P60369 221 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 CDK16Q00536 496 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 FOXF1Q12946 379 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TGFBIQ15582 683 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 PLPPR5Q32ZL2 321 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 CYP27C1Q4G0S4 372 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OXLD1Q5BKU9 147 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 DMRTC1Q5HYR2 192 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 SEL1L2Q5TEA6 688 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 MRM1Q6IN84 353 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 CASP12Q6UXS9 341 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 PAGE2Q7Z2X7 111 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 PEX26Q7Z412 305 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 LAS2Q8IYD9 372 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 C17orf78Q8N4C9 275 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 RNF10Q8N5U6 811 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 WDR31Q8NA23 367 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 C2CD4AQ8NCU7 369 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OR52E4Q8NGH9 312 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 ARL8AQ96BM9 186 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 WDR34Q96EX3 536 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TIMD4Q96H15 378 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF48Q96MX3 618 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 MUS81Q96NY9 551 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 NPAS1Q99742 590 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 GAL3ST1Q99999 423 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TMEM79Q9BSE2 394 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 KATNB1Q9BVA0 655 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 RTN4RQ9BZR6 473 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 TRIM5Q9C035 493 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 MS4A5Q9H3V2 200 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 DDX31Q9H8H2 851 aaKnown RBP5.44□□□□□ -1.54
SDCBP-203ENST00000424270 MARCH7Q9H992 704 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 Q9N2J8 555 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 PALMDQ9NP74 551 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 SAYSD1Q9NPB0 183 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 GIMAP4Q9NUV9 329 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 UBAP1Q9NZ09 502 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 SEC14L4Q9UDX3 406 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 OPN4Q9UHM6 478 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 NOX1Q9Y5S8 564 aa5.44□□□□□ -1.54
SDCBP-203ENST00000424270 CMYA5Q8N3K9 4069 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZCWPW2A0A1B0GU75 182 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 A0A1W2PPW3 197 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 TCRBV7S3A2A0A539 114 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 C1orf226A1L170 272 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF724A8MTY0 619 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF195O14628 629 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 CYTIPO60759 359 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PRAMEF4O60810 478 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 COQ9O75208 318 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 KCNH1O95259 989 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 AHSGP02765 367 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 HPXP02790 462 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SFTPBP07988 381 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 LTA4HP09960 611 aaKnown RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 MYZAPP0CAP1 466 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF37AP17032 561 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ELK4P28324 431 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 BSGP35613 385 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SLC12A2P55011 1212 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SLC25A3Q00325 362 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SLC18A2Q05940 514 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 MGAT2Q10469 447 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ZNF460Q14592 562 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 TRIP13Q15645 432 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 OASLQ15646 514 aaKnown RBP5.43□□□□□ -1.54
SDCBP-203ENST00000424270 TBCCQ15814 346 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 HIKESHIQ53FT3 197 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ELFN2Q5R3F8 820 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 PRAMEF9Q5VWM5 478 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SULT1C3Q6IMI6 304 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SLC48A1Q6P1K1 146 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
SDCBP-203ENST00000424270 OR9A2Q8NGT5 310 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms