RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 TTC9Q92623 222 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TFAP2CQ92754 450 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 GTPBP3Q969Y2 492 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SH3YL1Q96HL8 342 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CNTNAP3BQ96NU0 1288 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FEVQ99581 238 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PITX2Q99697 317 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TEX12Q9BXU0 123 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CNTNAP3Q9BZ76 1288 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 UCK2Q9BZX2 261 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 MAN2C1Q9NTJ4 1040 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 TBC1D23Q9NUY8 699 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 RLIMQ9NVW2 624 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PPP4R1LQ9P1A2 415 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 MYOTQ9UBF9 498 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 KCNE5Q9UJ90 142 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 SLC7A7Q9UM01 511 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 FARSAQ9Y285 508 aaKnown RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 MED31Q9Y3C7 131 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 PCDHGA6Q9Y5G7 932 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 GMPPBQ9Y5P6 360 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 MAGED1Q9Y5V3 778 aaPredicted RBP5.47□□□□□ -1.53
HMGB3-202ENST00000419110 NPFFR2Q9Y5X5 522 aa5.47□□□□□ -1.53
HMGB3-202ENST00000419110 A0A0C4DFX4 3053 aa5.46□□□□□ -1.53
HMGB3-202ENST00000419110 LOC100130705A0A1B0GUX0 176 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SLC35F4A4IF30 521 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ELOA3DA6NLF2 546 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CDRT15L2A8MXV6 281 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 H3BN98 237 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 KPNA4O00629 521 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 DLGAP1O14490 977 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FFAR1O14842 300 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SLC16A6O15403 523 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PRKNO60260 465 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PIP5K1CO60331 668 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CDC40O60508 579 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 EIF4E2O60573 245 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 TPST2O60704 377 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SEMA7AO75326 666 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ITGA10O75578 1167 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 OR2J2O76002 312 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 OR6B1O95007 311 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SOX14O95416 240 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NADKO95544 446 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ANGPTL1O95841 491 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SERPINA7P05543 415 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FBXO45P0C2W1 286 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 LINGO3P0C6S8 592 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PNMTP11086 282 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PRG2P13727 222 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SDHBP21912 280 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PRKACGP22612 351 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 RYKP34925 604 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 GPR4P46093 362 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 IDH2P48735 452 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 DAPP51397 102 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 HMGA2P52926 109 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FBXW4P57775 412 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ADARB1P78563 741 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 HOXC5Q00444 222 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 IL5RAQ01344 420 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PLAURQ03405 335 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF117Q03924 483 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FOXD4Q12950 439 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NPRL3Q12980 569 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CHAF1BQ13112 559 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ATP1A4Q13733 1029 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SSPNQ14714 243 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SEC23BQ15437 767 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NTRK2Q16620 822 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NDUFAF6Q330K2 333 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ELOA3BQ3SY89 546 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 KCTD21Q4G0X4 260 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 KLHL26Q53HC5 615 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FAM69BQ5VUD6 431 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF691Q5VV52 312 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 JMJD6Q6NYC1 403 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PODNL1Q6PEZ8 512 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ULK3Q6PHR2 472 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 TTC33Q6PID6 262 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 KIRREL2Q6UWL6 708 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CASP12Q6UXS9 341 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 MBOAT2Q6ZWT7 520 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 USP51Q70EK9 711 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NUP54Q7Z3B4 507 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 THAP5Q7Z6K1 395 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NRMQ8IXM6 262 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 GPALPP1Q8IXQ4 340 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CDK20Q8IZL9 346 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF786Q8N393 782 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM156Q8N614 296 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 LSMEM1Q8N8F7 131 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ELOA3Q8NG57 546 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 OR5M3Q8NGP4 307 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 B4GALNT2Q8NHY0 566 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 GNPDA2Q8TDQ7 276 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ELP5Q8TE02 316 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms