RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 AGAP7PQ5VUJ5 663 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SBSNQ6UWP8 590 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 LGALS12Q96DT0 336 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 AGAP4Q96P64 663 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 CALHM2Q9HA72 323 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 UBQLN4Q9NRR5 601 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SERTAD4Q9NUC0 356 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 MEIS3P1A6NDR6 274 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 CD300LBA8K4G0 201 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 PCGF2P35227 344 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 HTR5AP47898 357 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SELENOWP63302 87 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 KRBOX4Q5JUW0 171 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SFRP5Q5T4F7 317 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SLC22A10Q63ZE4 541 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF585AQ6P3V2 769 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 FBXW12Q6X9E4 464 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 TEX19Q8NA77 164 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 STK35Q8TDR2 534 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 RNF128Q8TEB7 428 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 DCUN1D4Q92564 292 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 GAREM1Q9H706 876 aa10.53□□□□□ -0.72
PTCH1-205ENST00000418258 SMCHD1A6NHR9 2005 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TDRD6O60522 2096 aaKnown RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 MAT1AQ00266 395 aaKnown RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 PM20D1Q6GTS8 502 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 LMF2Q9BU23 707 aaKnown RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 HAPLN2Q9GZV7 340 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 ZNF443Q9Y2A4 671 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 WIF1Q9Y5W5 379 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 ENPP4Q9Y6X5 453 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TOR1AO14656 332 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 SLC43A1O75387 559 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 DCNP07585 359 aaKnown RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 GGT1P19440 569 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TM4SF4P48230 202 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 KHDC1LQ5JSQ8 128 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TMEM31Q5JXX7 168 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 SLC16A14Q7RTX9 510 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TP53INP2Q8IXH6 220 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 ZADH2Q8N4Q0 377 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 C19orf47Q8N9M1 422 aaKnown RBP10.52□□□□□ -0.72
PTCH1-205ENST00000418258 CD200R1Q8TD46 325 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 GIMAP5Q96F15 307 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 SLC45A3Q96JT2 553 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 RNF38Q9H0F5 515 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.72
PTCH1-205ENST00000418258 TRAV27A0A087WT01 109 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 C12orf71A8MTZ7 269 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 CTBSQ01459 385 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 MBTPS1Q14703 1052 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 TECPR1Q7Z6L1 1165 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 CPOQ8IVL8 374 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 BBS1Q8NFJ9 593 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 ZFP57Q9NU63 452 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 DNAJC15Q9Y5T4 150 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 ARHGEF15O94989 841 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 F3P13726 295 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 GMPRP36959 345 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 MLF2Q15773 248 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 AARDQ4LEZ3 155 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 TRIM61Q5EBN2 209 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 CLN5O75503 358 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 IL2RGP31785 369 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 SNAPC3Q92966 411 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 UCN3Q969E3 161 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 FKRPQ9H9S5 495 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 NMNAT1Q9HAN9 279 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 CEBPZOSA8MTT3 80 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 CD79BP40259 229 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 MOGSQ13724 837 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 KIAA1211LQ6NV74 962 aa10.52□□□□□ -0.73
PTCH1-205ENST00000418258 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 MAGED1Q9Y5V3 778 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 POLR2AP24928 1970 aaKnown RBP10.52□□□□□ -0.73
PTCH1-205ENST00000418258 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 TSPAN15O95858 294 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 DCTP40126 519 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 CYCSP99999 105 aaKnown RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 POU3F1Q03052 451 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 NIPAL3Q6P499 406 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 KANSL1Q7Z3B3 1105 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 ASCC1Q8N9N2 400 aaKnown RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 OR14A16Q8NHC5 309 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 MSANTD3Q96H12 275 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 SUSD5O60279 629 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 TUSC2O75896 110 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 CD68P34810 354 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-205ENST00000418258 ALDH3B2P48448 385 aa10.51□□□□□ -0.73
PTCH1-205ENST00000418258 FAM57BQ71RH2 274 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms