RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CYHR1Q6ZMK1 362 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
BDNF-208ENST00000418212 POGLUT1Q8NBL1 392 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 CHTF18Q8WVB6 975 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 SPRYD4Q8WW59 207 aaPredicted RBP12.36□□□□□ -0.43
BDNF-208ENST00000418212 EPHX3Q9H6B9 360 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 CBLCQ9ULV8 474 aa12.36□□□□□ -0.43
BDNF-208ENST00000418212 COL4A5P29400 1685 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TARM1B6A8C7 271 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 MEN1O00255 615 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 GFRA2O00451 464 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CTDSP2O14595 271 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SYNGR4O95473 234 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SCGB1D2O95969 90 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 YES1P07947 543 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PDX1P52945 283 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PPP5CP53041 499 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TMEM52BQ4KMG9 183 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ABHD17BQ5VST6 288 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PRAMEF20Q5VT98 475 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 Q6ZNB5 142 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 C19orf47Q8N9M1 422 aaKnown RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 HAVCR1Q96D42 359 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CACNG6Q9BXT2 260 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 HOXD1Q9GZZ0 328 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PCDHGB6Q9Y5F9 930 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 FXYD1O00168 92 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TMPRSS11DO60235 418 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ETHE1O95571 254 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TSPAN12O95859 305 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 F10P00742 488 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ZNF84P51523 738 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 OXA1LQ15070 435 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TMEM196Q5HYL7 178 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ULK3Q6PHR2 472 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 MFSD9Q8NBP5 474 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ACOT13Q9NPJ3 140 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PARPBPQ9NWS1 579 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 A6NCN8 305 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 F5H5K5 113 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SULT1C4O75897 302 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CAV3P56539 151 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ACTA2P62736 377 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ACTG2P63267 376 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 NKX3-2P78367 333 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 TNFRSF17Q02223 184 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 BCL7AQ4VC05 210 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ZNF691Q5VV52 312 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ZNF611Q8N823 705 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CCDC54Q8NEL0 328 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 DUSP19Q8WTR2 217 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 GGHQ92820 318 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 FAM71F1Q96KD3 344 aaPredicted RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SYNPO2LQ9H987 977 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 UBQLN4Q9NRR5 601 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 ZNF443Q9Y2A4 671 aaPredicted RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 LCMT2O60294 686 aaKnown RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 SLC16A7O60669 478 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 GATBO75879 557 aaKnown RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 FRKP42685 505 aaPredicted RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 RGS6P49758 472 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ARHGDIBP52566 201 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 MLF2Q15773 248 aaPredicted RBP12.35□□□□□ -0.43
BDNF-208ENST00000418212 DESI1Q6ICB0 168 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 MRGPRX1Q96LB2 322 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 NDUFAF4Q9P032 175 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
BDNF-208ENST00000418212 ISPDA4D126 451 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 LRIT2A6NDA9 550 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 H7C1C5 153 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 MAOAP21397 527 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 LCN6P62502 163 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 E2F1Q01094 437 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 TRMT12Q53H54 448 aaKnown RBP12.34□□□□□ -0.43
BDNF-208ENST00000418212 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 FAM71E1Q6IPT2 247 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 KIAA1211LQ6NV74 962 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 FCAMRQ8WWV6 532 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 BTBD2Q9BX70 525 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 SCP2D1Q9UJQ7 156 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 SCGNO76038 276 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 CDK1P06493 297 aa12.34□□□□□ -0.43
BDNF-208ENST00000418212 REEP5Q00765 189 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms